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Protein
Submitted name:

Peripherin

Gene

Prph

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
PeripherinImported
Submitted name:
Peripherin 1, isoform CRA_bImported
Gene namesi
Name:PrphImported
Synonyms:Prph1Imported
ORF Names:mCG_18385Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:97774 Prph

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

MaxQBiG3X981
PeptideAtlasiG3X981

Expressioni

Gene expression databases

BgeeiENSMUSG00000023484

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000049303

Structurei

3D structure databases

SMRiG3X981
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 99Filament_headInterPro annotationAdd BLAST80

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili91 – 139Sequence analysisAdd BLAST49
Coiled coili145 – 253Sequence analysisAdd BLAST109
Coiled coili330 – 382Sequence analysisAdd BLAST53
Coiled coili387 – 421Sequence analysisAdd BLAST35

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IE39 Eukaryota
ENOG410YCMG LUCA
GeneTreeiENSGT00910000143989
OMAiYDKVDFT
OrthoDBiEOG091G12MK
TreeFamiTF330122

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR006821 Intermed_filament_DNA-bd
IPR018039 Intermediate_filament_CS
IPR027700 PRPH/Plasticin
PANTHERiPTHR23239 PTHR23239, 2 hits
PTHR23239:SF29 PTHR23239:SF29, 2 hits
PfamiView protein in Pfam
PF00038 Filament, 2 hits
PF04732 Filament_head, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF, 1 hit

Sequencei

Sequence statusi: Complete.

G3X981-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSSASMSHH HSSGLRSSIS STSYRRTFGP PPSLSPGAFS YSSSSRFSSS
60 70 80 90 100
RLLGSGSPSS SARLGSFRAP RAGALRLPSE RLDFSMAEAL NQEFLATRSN
110 120 130 140 150
EKQELQELND RFANFIEKVR FLEQQNAALR GELSQARGQE PARADQLCQQ
160 170 180 190 200
ELRELRRELE LLGRERDRVQ VERDGLAEDL AALKQRLEEE TRKREDAEHN
210 220 230 240 250
LVLFRKDVDD ATLSRLELER KIESLMDEIE FLKKLHEEEL RDLQVSVESQ
260 270 280 290 300
QVQQVEVEAT VKPELTAALR DIRAQYENIA AKNLQEAEEW YKSKVREHWG
310 320 330 340 350
NPGGPRVGRH WEWRCASQPG LSATAQYADL SDAANRNHEA LRQAKQEMNE
360 370 380 390 400
SRRQIQSLMC EVDGLRGTNE ALLRQLRELE EQFALEAGGY QAGAARLEEE
410 420 430 440 450
LRQLKEEMAR HLREYQELLN VKMALDIEIA TYRKLLEGEE SRISVPVHSF
460 470 480 490 500
ASLSLKTTVP EMEPLQDSHS KKMVLIRTIE TRDGEKVVTE SQKEQHSDLD

KSSIHSY
Length:507
Mass (Da):57,864
Last modified:November 16, 2011 - v1
Checksum:i8E26609474CD6D06
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC157610 Genomic DNA No translation available.
CH466550 Genomic DNA Translation: EDL04148.1
RefSeqiNP_038667.2, NM_013639.2
XP_006520694.1, XM_006520631.3
UniGeneiMm.2477

Genome annotation databases

EnsembliENSMUST00000047104; ENSMUSP00000049303; ENSMUSG00000023484
GeneIDi19132
UCSCiuc007xon.2 mouse

Similar proteinsi

Entry informationi

Entry nameiG3X981_MOUSE
AccessioniPrimary (citable) accession number: G3X981
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 25, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health