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Protein
Submitted name:

Protein Sec24c

Gene

Sec24c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transportSAAS annotation, Transport

Enzyme and pathway databases

ReactomeiR-MMU-204005. COPII (Coat Protein 2) Mediated Vesicle Transport.
R-MMU-2132295. MHC class II antigen presentation.
R-MMU-5694530. Cargo concentration in the ER.
R-MMU-983170. Antigen Presentation: Folding, assembly and peptide loading of class I MHC.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Sec24cImported
Submitted name:
SEC24 related gene family, member C (S. cerevisiae), isoform CRA_aImported
Gene namesi
Name:Sec24cImported
ORF Names:mCG_121333Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 14

Organism-specific databases

MGIiMGI:1919746. Sec24c.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000039367.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000045955.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini424 – 46239zf-Sec23_Sec24InterPro annotationAdd
BLAST
Domaini501 – 745245Sec23_trunkInterPro annotationAdd
BLAST
Domaini750 – 83384Sec23_BSInterPro annotationAdd
BLAST
Domaini846 – 945100Sec23_helicalInterPro annotationAdd
BLAST
Domaini965 – 103672Gelsolin-likeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1985. Eukaryota.
COG5028. LUCA.
GeneTreeiENSGT00590000082962.
OMAiNNTPPEI.
OrthoDBiEOG091G0288.
TreeFamiTF300464.

Family and domain databases

Gene3Di3.40.20.10. 1 hit.
3.40.50.410. 1 hit.
InterProiIPR029006. ADF-H/Gelsolin-like_dom.
IPR007123. Gelsolin-like_dom.
IPR006900. Sec23/24_helical_dom.
IPR006896. Sec23/24_trunk_dom.
IPR012990. Sec23_24_beta_S.
IPR002035. VWF_A.
IPR006895. Znf_Sec23_Sec24.
[Graphical view]
PfamiPF00626. Gelsolin. 1 hit.
PF08033. Sec23_BS. 1 hit.
PF04815. Sec23_helical. 1 hit.
PF04811. Sec23_trunk. 1 hit.
PF04810. zf-Sec23_Sec24. 1 hit.
[Graphical view]
SUPFAMiSSF53300. SSF53300. 1 hit.
SSF81811. SSF81811. 1 hit.
SSF82754. SSF82754. 1 hit.
SSF82919. SSF82919. 1 hit.

Sequencei

Sequence statusi: Complete.

G3X972-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVNQSAPPV PPYGQNQPIY PGYHQSSYGG QPGPAAPATP YGAYNGPVPG
60 70 80 90 100
YQQAPPQGVP RAPPSSGAPP ASAAQVPCGQ TTYGQFGQGD IQNGPSSTAQ
110 120 130 140 150
MQRVPGSQQF GPPLAPVVSQ PAVLQPYGPP PTSTQVTAQL AGMQISGAVA
160 170 180 190 200
QAPPPSGLGY GPPTSLASAS GNFPNSGPYG SYPQSQAPPL SQAQGHPGVQ
210 220 230 240 250
PPLRSAPPLA SSFTSPASGG PQMPSMTGLL PPGQGFGSLP VNQANHVSSP
260 270 280 290 300
PAPALPPGTQ MTGPPVPPPP PMHSPQQPGY QLQQNGSFGP ARGPQPNYES
310 320 330 340 350
PYPGAPTFGS QPGPPQPLPP KRLDPDAIPS PIQVIEDDRN NRGSEPFVTG
360 370 380 390 400
VRGQVPPLVT TNFLVKDQGN ASPRYIRCTS YNIPCTSDMA KQAQVPLAAV
410 420 430 440 450
IKPLARLPPE EASPYVVDHG ESGPLRCNRC KAYMCPLMTF IEGGRRFQCS
460 470 480 490 500
FCSCVNDVPP QYFQHLDHTG KRVDAYDRPE LSLGSYEFLA TVDYCKNNKF
510 520 530 540 550
PSPPAFIFMI DVSYNAIRTG LVRLLCEELK SLLDYLPREG GAEESAIRVG
560 570 580 590 600
FVTYNKVLHF YNVKSSLAQP QMMVVSDVAD MFVPLLDGFL VNVSESRAVI
610 620 630 640 650
TSLLDQIPEM FADTRETETV FAPVIQAGME ALKAAECAGK LFLFHTSLPI
660 670 680 690 700
AEAPGKLKNR DDRKLINTDK EKTLFQPQTG TYQTLAKECV AQGCCVDLFL
710 720 730 740 750
FPNQYVDVAT LSVVPQLTGG SVYKYACFQV ENDQERFLSD LRRDVQKVVG
760 770 780 790 800
FDAVMRVRTS TGIRAVDFFG AFYMSNTTDV ELAGLDGDKT VTVEFKHDDR
810 820 830 840 850
LNEENGALLQ CALLYTSCAG QRRLRIHNLA LNCCTQLADL YRNCETDTLI
860 870 880 890 900
NYMAKFAYRA VLNSPVKTVR DTLITQCAQI LACYRKNCAS PSSAGQLILP
910 920 930 940 950
ECMKLLPVYL NCVLKSDVLQ PGAEVTTDDR AYVRQLVSSM DVAETNVFFY
960 970 980 990 1000
PRLLPLTKSP LDSTAEPPAV RASEERLSSG DIYLLENGLN LFVWVGASVQ
1010 1020 1030 1040 1050
QGVVQSLFNV SSFSQITSGL SVLPVLDNPL SKKVRGLIDS LRAQRMRYMK
1060 1070 1080 1090
LIVVKQEDKL EMLFKHFLVE DKSLSGGASY VDFLCHMHKE IRQLLS
Length:1,096
Mass (Da):118,581
Last modified:November 16, 2011 - v1
Checksum:iC614860FB9EDE158
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC121599 Genomic DNA. No translation available.
CH466613 Genomic DNA. Translation: EDL01498.1.
RefSeqiNP_766184.2. NM_172596.2.
UniGeneiMm.173119.

Genome annotation databases

EnsembliENSMUST00000048657; ENSMUSP00000045955; ENSMUSG00000039367.
GeneIDi218811.
UCSCiuc007skg.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC121599 Genomic DNA. No translation available.
CH466613 Genomic DNA. Translation: EDL01498.1.
RefSeqiNP_766184.2. NM_172596.2.
UniGeneiMm.173119.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000045955.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000048657; ENSMUSP00000045955; ENSMUSG00000039367.
GeneIDi218811.
UCSCiuc007skg.2. mouse.

Organism-specific databases

CTDi9632.
MGIiMGI:1919746. Sec24c.

Phylogenomic databases

eggNOGiKOG1985. Eukaryota.
COG5028. LUCA.
GeneTreeiENSGT00590000082962.
OMAiNNTPPEI.
OrthoDBiEOG091G0288.
TreeFamiTF300464.

Enzyme and pathway databases

ReactomeiR-MMU-204005. COPII (Coat Protein 2) Mediated Vesicle Transport.
R-MMU-2132295. MHC class II antigen presentation.
R-MMU-5694530. Cargo concentration in the ER.
R-MMU-983170. Antigen Presentation: Folding, assembly and peptide loading of class I MHC.

Miscellaneous databases

ChiTaRSiSec24c. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000039367.

Family and domain databases

Gene3Di3.40.20.10. 1 hit.
3.40.50.410. 1 hit.
InterProiIPR029006. ADF-H/Gelsolin-like_dom.
IPR007123. Gelsolin-like_dom.
IPR006900. Sec23/24_helical_dom.
IPR006896. Sec23/24_trunk_dom.
IPR012990. Sec23_24_beta_S.
IPR002035. VWF_A.
IPR006895. Znf_Sec23_Sec24.
[Graphical view]
PfamiPF00626. Gelsolin. 1 hit.
PF08033. Sec23_BS. 1 hit.
PF04815. Sec23_helical. 1 hit.
PF04811. Sec23_trunk. 1 hit.
PF04810. zf-Sec23_Sec24. 1 hit.
[Graphical view]
SUPFAMiSSF53300. SSF53300. 1 hit.
SSF81811. SSF81811. 1 hit.
SSF82754. SSF82754. 1 hit.
SSF82919. SSF82919. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiG3X972_MOUSE
AccessioniPrimary (citable) accession number: G3X972
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: September 7, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.