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Protein
Submitted name:

PHD finger protein 21A

Gene

PHF21A

Organism
Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AImported
Gene namesi
Name:PHF21AImported
OrganismiSarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius)Imported
Taxonomic identifieri9305 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDasyuromorphiaDasyuridaeSarcophilus
Proteomesi
  • UP000007648 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9305.ENSSHAP00000016521.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini472 – 519PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili7 – 34Sequence analysisAdd BLAST28
Coiled coili546 – 584Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IREA. Eukaryota.
ENOG41112YM. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiG3WM66.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.
TreeFamiTF331518.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

G3WM66-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQDPQNADL KKQLHELQAK ITALSEKQKR VVEQLRKNLI VKQEQPDRFQ
60 70 80 90 100
IQPLSQSENK LAPAQQQPPP PPLPPLPQQQ QQQQQYHHQQ QPAAPSPNLT
110 120 130 140 150
APSQKTVTTA SMITTKTLPL VLKAATATMP ASVVGQRPTI AMVTAINSQK
160 170 180 190 200
AVLSPDVQST PVNLQTSSKV AGPGAEAVQI VAKNTVTLVQ ATPPQPIKVP
210 220 230 240 250
QFIPPPRLTP RPNFLPQVRP KPVAQNNIPI APAPPPMLAA PQLIQRPVML
260 270 280 290 300
TKFTPTSLPT SQNSIHPVRV VNGQTATIAK TFPMAQLTSI VIAAPGARLA
310 320 330 340 350
GPQTVQLSKP SLEKQTIKSH TETEEKQAES RTITPPAAPK PKREENPQKL
360 370 380 390 400
AFMVSLGLVT HDHLEEIQSK RQERKRRTTA NPVYSGAVFE PERKKSAVTY
410 420 430 440 450
LNSTMHPGTR KRGRPPKYNA VLGFGALTPA SPLSSHPDSP ENEKTETTFT
460 470 480 490 500
FPAPVQPVSL PSPTSTDGDI HEDFCSVCRK SGQLLMCDTC SRVYHLDCLD
510 520 530 540 550
PPLKTIPKGM WICPKCQDQM LKKEEAIPWP GTLAIVHSYI AYKAAKEEEK
560 570 580 590 600
QKLLKWSSDL KQEREQLEQK VKQLSNSISK CMEMKNTILA RQKEMHGSLE
610 620 630 640 650
KVKQLIRLIH GIDLSKPMNS EAGSAALPNG PPRPASPRRP APAPPPRASP

SFRS
Length:654
Mass (Da):71,821
Last modified:November 16, 2011 - v1
Checksum:iFB6DF1CDA3D92C47
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEFK01222307 Genomic DNA. No translation available.
AEFK01222308 Genomic DNA. No translation available.
AEFK01222309 Genomic DNA. No translation available.
AEFK01222310 Genomic DNA. No translation available.
AEFK01222311 Genomic DNA. No translation available.
AEFK01222312 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSHAT00000016659; ENSSHAP00000016521; ENSSHAG00000014057.

Similar proteinsi

Entry informationi

Entry nameiG3WM66_SARHA
AccessioniPrimary (citable) accession number: G3WM66
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: August 30, 2017
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported