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G3WFE8 (G3WFE8_SARHA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length517 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. SAAS SAAS006589 RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSSHAP00000014153

Sequences

Sequence LengthMass (Da)Tools
G3WFE8 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 7B6FFDB44924ACB7

FASTA51758,861
        10         20         30         40         50         60 
MRLLLLLSVL GVCWAQYNPH TVPGRTSIVH LFEWRWDDIA LECERYLAPN GFGGVQISPP 

        70         80         90        100        110        120 
NENVVINNPS RPWWERYQPV SYKICTRSGN EDEFRDMVTR CNNVGVRIYV DAVVNHMCGN 

       130        140        150        160        170        180 
GVSSGTSSTC GSYFNPGLRD FPDVPYSAWD FNDGKCKSYS GDVENYNDIY QVRDCRLVGL 

       190        200        210        220        230        240 
LDLALEKDYV RSKIAEYMNH LIDIGVAGFR IDASKHMWPG DMKAFLDKLK NLNTSWFPEG 

       250        260        270        280        290        300 
ARPFIYQEVI DLGGEAIKSS DYFGNGRVTE FKYGAKLGTV LRKWSGEKMA YLKNWGEGWA 

       310        320        330        340        350        360 
FMPSNRALVF VDNHDNQRGH GAGGSSILTF WDPRLYKMGV GFMLAHPYGF TRVMSSFRWP 

       370        380        390        400        410        420 
RYFVNGKDIN DWVGPPNENG VIKRVTVNPD TTCGNDWVCE HRWRQIRNMV IFRNVVDGQP 

       430        440        450        460        470        480 
FTNWWDNGNN QVAFGRGNRG FIVFNNDDWE LSVTLQTGLP AGTYCDVISG DKIDNQCTGI 

       490        500        510 
KIYVSGDGRA YFNIKNTAED PFIAIHMDSK LHIKLDK 

« Hide

References

« Hide 'large scale' references
[1]"Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil)."
Miller W., Hayes V.M., Ratan A., Petersen D.C., Wittekindt N.E., Miller J., Walenz B., Knight J., Qi J., Zhao F., Wang Q., Bedoya-Reina O.C., Katiyar N., Tomsho L.P., Kasson L.M., Hardie R.A., Woodbridge P., Tindall E.A. expand/collapse author list , Bertelsen M.F., Dixon D., Pyecroft S., Helgen K.M., Lesk A.M., Pringle T.H., Patterson N., Zhang Y., Kreiss A., Woods G.M., Jones M.E., Schuster S.C.
Proc. Natl. Acad. Sci. U.S.A. 108:12348-12353(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AEFK01175434 Genomic DNA. No translation available.
AEFK01175435 Genomic DNA. No translation available.
RefSeqXP_003769749.1. XM_003769701.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSHAT00000014270; ENSSHAP00000014153; ENSSHAG00000012096.
GeneID100917086.
KEGGshr:100917086.

Organism-specific databases

CTD279.

Phylogenomic databases

GeneTreeENSGT00390000002882.
KOK01176.
OMASQVRDCR.
OrthoDBEOG7RJPR2.
TreeFamTF312850.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG3WFE8_SARHA
AccessionPrimary (citable) accession number: G3WFE8
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)