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Protein
Submitted name:

Ring finger protein 40

Gene

RNF40

Organism
Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Ring finger protein 40Imported
Gene namesi
Name:RNF40Imported
OrganismiSarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius)Imported
Taxonomic identifieri9305 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDasyuromorphiaDasyuridaeSarcophilus
Proteomesi
  • UP000007648 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9305.ENSSHAP00000011386

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini961 – 1000RING-typeInterPro annotationAdd BLAST40

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili63 – 83Sequence analysisAdd BLAST21
Coiled coili226 – 246Sequence analysisAdd BLAST21
Coiled coili258 – 306Sequence analysisAdd BLAST49
Coiled coili329 – 373Sequence analysisAdd BLAST45
Coiled coili438 – 465Sequence analysisAdd BLAST28
Coiled coili487 – 521Sequence analysisAdd BLAST35
Coiled coili651 – 685Sequence analysisAdd BLAST35
Coiled coili706 – 733Sequence analysisAdd BLAST28
Coiled coili736 – 770Sequence analysisAdd BLAST35
Coiled coili813 – 833Sequence analysisAdd BLAST21
Coiled coili841 – 861Sequence analysisAdd BLAST21
Coiled coili911 – 938Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0978 Eukaryota
ENOG410Y5C6 LUCA
GeneTreeiENSGT00390000002866
KOiK10696
OMAiQRVYSRG
OrthoDBiEOG091G01SA
TreeFamiTF323183

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR013956 E3_ubiquit_lig_Bre1
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR23163 PTHR23163, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

G3W7I2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGAGNKRAA GDGGSGPSEK KQNREEKTTT TLIEPIRLGG ISSTEEMDLK
60 70 80 90 100
VLQFKNKKLA ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ
110 120 130 140 150
LDETVEVLLR RHEGRGELLS RTEGQGTQDS IELDGVPLPE PGTTERRDLP
160 170 180 190 200
TLQLRPSLSE PALAFVAALG ASSSEEVELQ LQGRMEFSKA AVSRVVEASD
210 220 230 240 250
RLHRRVEELC HRVQSRGECE SLGEGLRTLT RELGQDNRRL QDLTTQLQEK
260 270 280 290 300
HHRISLEYSE LQDKVTSAET KVLEMETSVE DLQWDIEKLR KREQKLNKHL
310 320 330 340 350
AEALEQLNSG YYVSGSSGSF QGGQITLSMQ KFEMLNAELE ENQELANSRM
360 370 380 390 400
AELEKLQAEL QGAVRSNERL KVALRSLPEE VVRETGEYRL LQAQFSLLYN
410 420 430 440 450
ESLQVKTQLD EARGLLLATK NSHLRHIEHM ESDELSLQKK LRTEVIQLED
460 470 480 490 500
TLAQVRKEYE MLRIEFEQNL AANEQAGPIN REMRHLISSL QNHNHQLKGD
510 520 530 540 550
AQRYKRKLRE VQAEIGKLRA QTIGSGPSAP SQTASEDQGS GVGGTLAPVK
560 570 580 590 600
EEESSGSGPA VLQEAKKESL SAPVTPTAST ASVVKKEEPS FEEEVPLTQA
610 620 630 640 650
QTPHPAPQTP ASRSRETEPR GKRESRDREG SASGTPTSSS SSSSSRGDRD
660 670 680 690 700
KAKAEESKRK ESELLKGLRG ELKKAQESQK EMKLLLDMYK SAPKEQRDKV
710 720 730 740 750
QLMAAERKAK AEVDELRGRI RDLEEKERKE SKKLADEDAL RRIRLAEEQI
760 770 780 790 800
EHLQRKLGAT KQEEEALLSE MDVTGQAFED MQEQNGRLIQ QLREKDDANF
810 820 830 840 850
KLMSERIKSN QIHKLLREEK DELGEQVLGL KSQVDAQLLV VQKLEEKERV
860 870 880 890 900
LQGSLGSVEK ELTLRSQALE LNKRKAVEAA QLAEDLKVQL EHVQSRLREI
910 920 930 940 950
QPCLAESRAA REKESFNLKR AQEDISRLRR KLEKQKKVEV YADADEILQE
960 970 980 990 1000
EIKEYKARLT CPCCNTRKKD AVLTKCFHVF CFECVRGRYE ARQRKCPKCN
1010
AAFGAHDFHR VYIS
Length:1,014
Mass (Da):114,996
Last modified:November 16, 2011 - v1
Checksum:i34E7AAA72D8D4951
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEFK01076745 Genomic DNA No translation available.
AEFK01076746 Genomic DNA No translation available.
AEFK01076747 Genomic DNA No translation available.
RefSeqiXP_003761636.1, XM_003761588.2

Genome annotation databases

EnsembliENSSHAT00000011482; ENSSHAP00000011386; ENSSHAG00000009792
ENSSHAT00000011483; ENSSHAP00000011387; ENSSHAG00000009792
GeneIDi100928099
KEGGishr:100928099

Similar proteinsi

Entry informationi

Entry nameiG3W7I2_SARHA
AccessioniPrimary (citable) accession number: G3W7I2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health