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G3VPQ0 (G3VPQ0_SARHA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length813 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSSHAP00000005155

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3741 By similarity PIRSR PIRSR000459-1
Active site4331 By similarity PIRSR PIRSR000459-1
Active site4561 By similarity PIRSR PIRSR000459-1
Metal binding4961Calcium By similarity PIRSR PIRSR000459-2
Metal binding4981Calcium By similarity PIRSR PIRSR000459-2
Metal binding5451Calcium By similarity PIRSR PIRSR000459-2
Metal binding5501Calcium By similarity PIRSR PIRSR000459-2

Sequences

Sequence LengthMass (Da)Tools
G3VPQ0 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 65AC13BA88F71DC8

FASTA81388,966
        10         20         30         40         50         60 
MTDGSRSDVG RWGGSSWQPS VTPSPEPEPD TRSRGSGRSF WARCCSCCSC RGGADDDWGP 

        70         80         90        100        110        120 
EPAGPRGSGS RGSGRPGSRG SRGSGRPGSR GSGVNAAGDG VVRDGMLVVT GVDLMSGRSD 

       130        140        150        160        170        180 
QNRREHHTED YEYDDLIIRR GQPFLVTVSL SRPYSSSDRM ALELLIGANP EIGKGTHVII 

       190        200        210        220        230        240 
PVGKGGSGGW KAQVIKSNGQ HVDLKVHVSA NAIVGKFRFT VRTRTDAGEF QLPFDPRNEI 

       250        260        270        280        290        300 
YILFNPWCSD DPVYVEHESW RQEYVLNESG RIYYGTEAQI GERTWNYGQF DHGVLDACLY 

       310        320        330        340        350        360 
ILDRRGMPYA GRGDPVSVSR VISAMVNSLD DNGVLIGNWS GDYSRGTNPS AWVGSVEILL 

       370        380        390        400        410        420 
SYLRTGYSVP YGQCWVFAGV TTTVLRCLGI ATRTVTNYNS AHDTDTSLTM DIYFDENMKP 

       430        440        450        460        470        480 
LEHLNRDSVW NFHVWNDCWM RRSDLQSGFD GWQVVDATPQ ETSSGIFCCG PCSVESIKNG 

       490        500        510        520        530        540 
LVYMKYDTPF IFAEVNSDKV YWQRQDDGSF KIVYVEEKAI GTLICTKAVG SNMREDITHI 

       550        560        570        580        590        600 
YKHPEGSDAE RKAVETAAAH GSKPNIYSNR DSAEDVSVQV EAQDAVMGQD LVVNVVLTNR 

       610        620        630        640        650        660 
GSSRRTVKLH LYLSVTFYTG VTGPVFKDSK KEVALSPGSS ERVALPVAYS EYRPHLVDQG 

       670        680        690        700        710        720 
AMLLNVSGHV KENGQVIAKQ HTFRLRTPDL SLTVLGAAVV GQETEVQIIF RNPLPVTLTK 

       730        740        750        760        770        780 
VVFRLEGSGL QRPKVLNVGD IGGNETVTLR QTFVPVRPGR RQLIASLDSP QLSQVHGVIE 

       790        800        810 
VDVAPASGGN FFSGNRGSSR SGENVPMALR GEA

« Hide

References

« Hide 'large scale' references
[1]"Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil)."
Miller W., Hayes V.M., Ratan A., Petersen D.C., Wittekindt N.E., Miller J., Walenz B., Knight J., Qi J., Zhao F., Wang Q., Bedoya-Reina O.C., Katiyar N., Tomsho L.P., Kasson L.M., Hardie R.A., Woodbridge P., Tindall E.A. expand/collapse author list , Bertelsen M.F., Dixon D., Pyecroft S., Helgen K.M., Lesk A.M., Pringle T.H., Patterson N., Zhang Y., Kreiss A., Woods G.M., Jones M.E., Schuster S.C.
Proc. Natl. Acad. Sci. U.S.A. 108:12348-12353(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AEFK01008995 Genomic DNA. No translation available.
RefSeqXP_003755945.1. XM_003755897.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSHAT00000005206; ENSSHAP00000005155; ENSSHAG00000004507.
GeneID100918933.
KEGGshr:100918933.

Organism-specific databases

CTD7051.

Phylogenomic databases

GeneTreeENSGT00690000101887.
KOK05619.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF81296. Ig_E-set. 1 hit.
SSF49309. Transglut_C. 2 hits.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG3VPQ0_SARHA
AccessionPrimary (citable) accession number: G3VPQ0
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info