Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

G3V9V1

- G3V9V1_RAT

UniProt

G3V9V1 - G3V9V1_RAT

Protein
Submitted name:

Protein Fam84a

Gene

Fam84a

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Fam84aImported
    Submitted name:
    RCG62167Imported
    Gene namesi
    Name:Fam84aImported
    ORF Names:rCG_62167Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 6

    Organism-specific databases

    RGDi1305779. Fam84a.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000013755.
    OMAiRIVNNRY.
    OrthoDBiEOG7HXCRJ.
    TreeFamiTF330836.

    Family and domain databases

    InterProiIPR007053. LRAT-like_dom.
    [Graphical view]
    PfamiPF04970. LRAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G3V9V1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPANQSVIVQ GAVRDGISVP GPGLAASLMG NQLDRITHLN YSELPTGDPS    50
    GIEKDELRVG VAYFFSDEEE DLDERGQPDK FGVKGPPGCS PCPESPSRHH 100
    HHLLHQLVLN ETQFSAFRGQ ECIFSKVTGG PQGADLSVYA VTALPAICEP 150
    GDLLELLWLQ PATEQPAPAP HWAVYVGGGQ IIHLHQGEIR QDSLYQAGAA 200
    NVGRVVNSWY RYRPLVAELV VQNACGHLGL KSEEICWTNS ESFAAWCRFG 250
    KREFKAGGEV PAGTQPPQQQ YYLKVHLEEN KVHTARFHSL EDLIREKRRI 300
    DASGRLRVLQ ELEDFVDDKE 320
    Length:320
    Mass (Da):35,377
    Last modified:November 16, 2011 - v1
    Checksum:i8CE2429A2B76E926
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06042940 Genomic DNA. No translation available.
    CH473947 Genomic DNA. Translation: EDM03123.1.
    RefSeqiNP_001120771.1. NM_001127299.1.
    UniGeneiRn.21319.

    Genome annotation databases

    EnsembliENSRNOT00000065531; ENSRNOP00000060795; ENSRNOG00000004084.
    GeneIDi313969.
    KEGGirno:313969.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06042940 Genomic DNA. No translation available.
    CH473947 Genomic DNA. Translation: EDM03123.1 .
    RefSeqi NP_001120771.1. NM_001127299.1.
    UniGenei Rn.21319.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000065531 ; ENSRNOP00000060795 ; ENSRNOG00000004084 .
    GeneIDi 313969.
    KEGGi rno:313969.

    Organism-specific databases

    CTDi 151354.
    RGDi 1305779. Fam84a.

    Phylogenomic databases

    GeneTreei ENSGT00390000013755.
    OMAi RIVNNRY.
    OrthoDBi EOG7HXCRJ.
    TreeFami TF330836.

    Miscellaneous databases

    NextBioi 667061.

    Family and domain databases

    InterProi IPR007053. LRAT-like_dom.
    [Graphical view ]
    Pfami PF04970. LRAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiG3V9V1_RAT
    AccessioniPrimary (citable) accession number: G3V9V1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3