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G3V7N6

- G3V7N6_RAT

UniProt

G3V7N6 - G3V7N6_RAT

Protein
Submitted name:

Protein LOC100909580

Gene

LOC100909580

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    ReactomeiREACT_199134. Acyl chain remodelling of PI.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein LOC100909580Imported
    Submitted name:
    RCG56817, isoform CRA_aImported
    Gene namesi
    Name:LOC100909580Imported
    Synonyms:Mboat7Imported
    ORF Names:rCG_56817Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 1

    Organism-specific databases

    RGDi6503080. LOC100909580.
    1306945. Mboat7.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00550000074565.
    KOiK13516.
    OMAiWTFLYLL.
    OrthoDBiEOG7BGHKQ.
    TreeFamiTF320024.

    Family and domain databases

    InterProiIPR004299. MBOAT_fam.
    [Graphical view]
    PfamiPF03062. MBOAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G3V7N6-1 [UniParc]FASTAAdd to Basket

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    MTPEEWTYLM VLLISIPVGF LFKKAGPGLK RWGAAAVGLG LTLFTCGPHS    50
    LHSLITILGT WALIQAQPCS CHALALAWTF SYLLFFRALS LLGLPTPTPF 100
    TNAVQLLLTL KLVSLASEVQ DLHLAQRKEM ASGFSKEPTL GLLPDVPSLM 150
    ETLSYSYCYV GIMTGPFFRY RTYLDWLEQP FPEAVPSLRP LLRRAWPAPL 200
    FGLLFLLSSH LFPLEAVRED AFYARPLPTR LFYMIPVFFA FRMRFYVAWI 250
    AAECGCIAAG FGAYPVAAKA RAGGGPTLQC PPPSSPEIAA SLEYDYEAIR 300
    NIDCYGTDFC VRVRDGMRYW NMTVQWWLAQ YIYKSAPFRS YVLRSAWTML 350
    LSAYWHGLHP GYYLSFMTIP LCLAAEGYLE SALRRHLSPG GQKAWDWFHW 400
    FLKMRAYDYM CMGFVLLSMG DTLRYWASIY FWVHFLALAC LGLGLALGGG 450
    SPSKRKTPSQ ATTSQAKEKL REE 473
    Length:473
    Mass (Da):53,380
    Last modified:November 16, 2011 - v1
    Checksum:iD39F0D7C8D55236B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06002893 Genomic DNA. No translation available.
    AABR06002894 Genomic DNA. No translation available.
    CH474101 Genomic DNA. Translation: EDL84928.1.
    RefSeqiXP_003748766.1. XM_003748718.2.
    XP_006228090.1. XM_006228028.1.
    XP_006228135.1. XM_006228073.1.
    UniGeneiRn.44782.

    Genome annotation databases

    EnsembliENSRNOT00000017002; ENSRNOP00000017002; ENSRNOG00000038794.
    ENSRNOT00000074360; ENSRNOP00000067213; ENSRNOG00000048120.
    GeneIDi100909580.
    308309.
    KEGGirno:100909580.
    rno:308309.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06002893 Genomic DNA. No translation available.
    AABR06002894 Genomic DNA. No translation available.
    CH474101 Genomic DNA. Translation: EDL84928.1 .
    RefSeqi XP_003748766.1. XM_003748718.2.
    XP_006228090.1. XM_006228028.1.
    XP_006228135.1. XM_006228073.1.
    UniGenei Rn.44782.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000017002 ; ENSRNOP00000017002 ; ENSRNOG00000038794 .
    ENSRNOT00000074360 ; ENSRNOP00000067213 ; ENSRNOG00000048120 .
    GeneIDi 100909580.
    308309.
    KEGGi rno:100909580.
    rno:308309.

    Organism-specific databases

    CTDi 79143.
    RGDi 6503080. LOC100909580.
    1306945. Mboat7.

    Phylogenomic databases

    GeneTreei ENSGT00550000074565.
    KOi K13516.
    OMAi WTFLYLL.
    OrthoDBi EOG7BGHKQ.
    TreeFami TF320024.

    Enzyme and pathway databases

    Reactomei REACT_199134. Acyl chain remodelling of PI.

    Miscellaneous databases

    NextBioi 34070911.
    PROi G3V7N6.

    Family and domain databases

    InterProi IPR004299. MBOAT_fam.
    [Graphical view ]
    Pfami PF03062. MBOAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.
    5. Ensembl
      Submitted (FEB-2013) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiG3V7N6_RAT
    AccessioniPrimary (citable) accession number: G3V7N6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3