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Protein
Submitted name:

Hepatitis A virus cellular receptor 1 homolog

Gene

Havcr1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Hepatitis A virus cellular receptor 1 homologImported
Submitted name:
RCG34401, isoform CRA_aImported
Gene namesi
Name:Havcr1Imported
ORF Names:rCG_34401Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi708425. Havcr1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei236 – 261HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501109082422 – 307Sequence analysisAdd BLAST286

Expressioni

Gene expression databases

BgeeiENSRNOG00000007243.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 124Ig-likeInterPro annotationAdd BLAST109

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IYS0. Eukaryota.
ENOG4111VB0. LUCA.
GeneTreeiENSGT00440000039800.
OMAiLWHNNQT.
OrthoDBiEOG091G0Z1G.
TreeFamiTF336163.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR007110. Ig-like_dom.
IPR036179. Ig-like_dom_sf.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
PfamiView protein in Pfam
PF07686. V-set. 1 hit.
SMARTiView protein in SMART
SM00409. IG. 1 hit.
SUPFAMiSSF48726. SSF48726. 1 hit.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

G3V6W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQLQVFISG LLLLLPGSVD SYEVVKGVVG HPVTIPCTYS TRGGITTTCW
60 70 80 90 100
GRGQCPYSSC QNILIWTNGY QVTYRSSGRY NIKGRISEGD VSLTIENSVD
110 120 130 140 150
SDSGLYCCRV EIPGWFNDQK MTFSLEVKPE IPTSPPTRPT TTRPTTTRPT
160 170 180 190 200
TTSTRSTHVP TSTRVSTSTP TPEQTQTHKP EITTFYAHET TAEVTETPSY
210 220 230 240 250
TPADWNGTVT SSEEAWNNHT VRIPLRKPQR NPTKGFYVGM SVAALLLLLL
260 270 280 290 300
ASTVVVTRYI IIRKKMGSLS FVAFHVSKSR ALQNAAIVHP RAEDNIYIIE

DRSRGAE
Length:307
Mass (Da):33,951
Last modified:November 16, 2011 - v1
Checksum:i737DF3D33E8BB6AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC135694 Genomic DNA. No translation available.
CH473948 Genomic DNA. Translation: EDM04183.1.
CH473948 Genomic DNA. Translation: EDM04185.1.
RefSeqiXP_006246225.1. XM_006246163.3.
XP_008765887.1. XM_008767665.2.
XP_008765888.1. XM_008767666.2.
UniGeneiRn.11154.

Genome annotation databases

EnsembliENSRNOT00000009573; ENSRNOP00000009573; ENSRNOG00000007243.
GeneIDi286934.

Similar proteinsi

Entry informationi

Entry nameiG3V6W3_RAT
AccessioniPrimary (citable) accession number: G3V6W3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: October 25, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported