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Protein
Submitted name:

Prolactin regulatory element-binding protein

Gene

Preb

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-204005 COPII-mediated vesicle transport
R-RNO-5694530 Cargo concentration in the ER

Names & Taxonomyi

Protein namesi
Submitted name:
Prolactin regulatory element-binding proteinImported
Submitted name:
RCG62389, isoform CRA_aImported
Gene namesi
Name:PrebImported
ORF Names:rCG_62389Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi61929 Preb

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei312 – 330HelicalSequence analysisAdd BLAST19
Transmembranei391 – 413HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiG3V6W2

Expressioni

Gene expression databases

BgeeiENSRNOG00000007141

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini160 – 232WD_REPEATS_REGIONInterPro annotationAdd BLAST73
Repeati160 – 191WDPROSITE-ProRule annotationAdd BLAST32

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis, WD repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0771 Eukaryota
ENOG410XRQK LUCA
GeneTreeiENSGT00390000018031
OMAiAHSMFVT
OrthoDBiEOG091G06TN
TreeFamiTF314383

Family and domain databases

InterProiView protein in InterPro
IPR011047 Quinoprotein_ADH-like_supfam
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
PfamiView protein in Pfam
PF00400 WD40, 1 hit
SMARTiView protein in SMART
SM00320 WD40, 3 hits
SUPFAMiSSF50998 SSF50998, 2 hits
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

G3V6W2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRRRGVELY RAPFPLYALR IDPKTGLLIA AGGGGAAKTG IKNGVHFLQL
60 70 80 90 100
EQISGCLSAS LLHSHDTETR ATMNLALAGD ILAAGQDAQC QLLRFQIHQQ
110 120 130 140 150
KGSKAEKSGS KEQGPRQRKG AAPAEKKSGA EVHPEGVELK VKNLEAVQTD
160 170 180 190 200
FSTEPLQKVV CFNHDNTLLA TGGTDGHVRV WKVPSLEKVL EFKAHEGEIG
210 220 230 240 250
DLALGPDGKL VTVGWDFKAS VWQKDQLVTQ LQWQENGPTS SNTPYRYQAC
260 270 280 290 300
RFGQVPDQPG GLRLFTVQIP HKRLRQPPPC YLTAWDSSTF LPLQTRSCGH
310 320 330 340 350
EVISCLTVSE SGTFLGLGTV TGSVAIYIAF SLQRLYYVKE AHGIVVTDVT
360 370 380 390 400
FLPEKGCGPK LLGPHETALF SVAVDSRCQL HLLPSRRSVP VWLLLLLCVG
410
LIIVTILLLQ SAFPGFL
Length:417
Mass (Da):45,371
Last modified:November 16, 2011 - v1
Checksum:i8F059A182993C3A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120639 Genomic DNA No translation available.
CH473947 Genomic DNA Translation: EDM02956.1

Genome annotation databases

EnsembliENSRNOT00000009565; ENSRNOP00000009566; ENSRNOG00000007141

Similar proteinsi

Entry informationi

Entry nameiG3V6W2_RAT
AccessioniPrimary (citable) accession number: G3V6W2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 23, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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