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Protein
Submitted name:

Synaptotagmin-like 4, isoform CRA_a

Gene

Sytl4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-114608 Platelet degranulation

Names & Taxonomyi

Protein namesi
Submitted name:
Synaptotagmin-like 4, isoform CRA_aImported
Submitted name:
Synaptotagmin-like protein 4Imported
Gene namesi
Name:Sytl4Imported
ORF Names:rCG_38145Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi620204 Sytl4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiG3V6G6

Expressioni

Gene expression databases

BgeeiENSRNOG00000003526
ExpressionAtlasiG3V6G6 baseline and differential

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 122RabBDInterPro annotationAdd BLAST119
Domaini373 – 463C2InterPro annotationAdd BLAST91
Domaini528 – 618C2InterPro annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili22 – 49Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IT3S Eukaryota
ENOG410Y1U8 LUCA
GeneTreeiENSGT00810000125376
OMAiHYNHTFV
OrthoDBiEOG091G07OO
TreeFamiTF341184

Family and domain databases

CDDicd04029 C2A_SLP-4_5, 1 hit
Gene3Di2.60.40.150, 2 hits
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR000008 C2_dom
IPR035892 C2_domain_sf
IPR010911 Rab_BD
IPR037303 SLP-4/5_C2A
IPR028694 SYTL4
IPR011011 Znf_FYVE_PHD
IPR013083 Znf_RING/FYVE/PHD
PANTHERiPTHR10024:SF9 PTHR10024:SF9, 1 hit
PfamiView protein in Pfam
PF00168 C2, 2 hits
SMARTiView protein in SMART
SM00239 C2, 2 hits
SUPFAMiSSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50004 C2, 2 hits
PS50916 RABBD, 1 hit

Sequencei

Sequence statusi: Complete.

G3V6G6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEILDLSFL SEMERDLILS VLQRDEELRK ADEKRIRRLK NELLEIKRKG
60 70 80 90 100
AKRGSQHYSD RTCARCQEGL GRLISKSNTC VGCNHLVCRE CRVLESNGSW
110 120 130 140 150
RCKVCSKEIE LKKATGDWFY DQKVNRFAYR TGSDIIRMSL RRKPAVNKRE
160 170 180 190 200
TVGQSLLQQT QMGDIWPGRR IIQEQQKEQS VLFEVPKLKS GKSALEAESE
210 220 230 240 250
SLDSYTADSD STSRRDSLDK SGLFPEWKKM SAPKSQVEKE IAPGNQNAVC
260 270 280 290 300
GDEGDMIFKK NTRKVLRPSE YTKSVIDLRP EDVAQESGIL GDRSKSVPGL
310 320 330 340 350
SVDMEEEEEE EEDIDHLVKL HRQKLARGSM QSGSSMSTIG SMMSLYSEAG
360 370 380 390 400
DFGNVSVTGK IAFSLKFEQK TQTLVIHVKE CHQLAYADEA KKRSNPYVKT
410 420 430 440 450
YLLPDKSRQG KRKTSIKRDT INPLYDETFR YEISESLLAQ RTLQFSVWHH
460 470 480 490 500
GRFGRNTFLG EAEVHMDSWK LDKKLDHCLP LHGKISTESS PGLPAHKGEL
510 520 530 540 550
VVSLKYIPAS KLPVGGDRKK SKGGEGGELQ VWIKEAKNLT AAKSGGTSDS
560 570 580 590 600
FVKGYLLPMR NKASKRKTPV MKKTLNPHYN HTFVYNGVRL EDLQHMCLEL
610 620 630 640 650
TVWDREPLAS NDFLGGVRLG VGTGISSGEV VDWMDSTGEE VSLWQKMRQY
660 670
PGSWAEGTLQ LRSSMVKQKL GV
Length:672
Mass (Da):75,914
Last modified:November 16, 2011 - v1
Checksum:iE32F94572F3A8E8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07040578 Genomic DNA No translation available.
AABR07040579 Genomic DNA No translation available.
CH473969 Genomic DNA Translation: EDM07039.1
RefSeqiXP_006257275.1, XM_006257213.3
UniGeneiRn.107417

Genome annotation databases

EnsembliENSRNOT00000004909; ENSRNOP00000004909; ENSRNOG00000003526
GeneIDi140594

Similar proteinsi

Entry informationi

Entry nameiG3V6G6_RAT
AccessioniPrimary (citable) accession number: G3V6G6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 23, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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