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Protein
Submitted name:

Similar to RIKEN cDNA 6330548G22, isoform CRA_a

Gene

Snrnp35

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Enzyme and pathway databases

ReactomeiR-RNO-72165. mRNA Splicing - Minor Pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
Similar to RIKEN cDNA 6330548G22, isoform CRA_aImported
Submitted name:
U11/U12 small nuclear ribonucleoprotein 35 kDa proteinImported
Gene namesi
Name:Snrnp35Imported
Synonyms:RGD1310724Imported
ORF Names:rCG_21110Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 12

Organism-specific databases

RGDi1310724. Snrnp35.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000001060.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 129RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiKOG0113. Eukaryota.
COG0724. LUCA.
GeneTreeiENSGT00530000063750.
OMAiPENDWER.
OrthoDBiEOG091G0NV3.
TreeFamiTF331614.

Family and domain databases

CDDicd12237. RRM_snRNP35. 1 hit.
InterProiView protein in InterPro
IPR000504. RRM_dom.
IPR034146. snRNP35_RRM.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Complete.

G3V639-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDWMPIAKE YDPLKAGSID GTDEDPHDRA VWRAMLARYV PNKGVTGDPL
60 70 80 90 100
LTLFVARLNL QTKEEKLKEV FSRYGDIRRL RLVRDLVTGF SKGYAFIEYK
110 120 130 140 150
EERALLKAYR DADGLVIDQH EIFVDYELER TLRGWIPRRL GGGLGGKKES
160 170 180 190 200
GQLRFGGRDR PFRKPINLPV VKNEPHREGK RERRERSRSR DRHWDPRPRE
210 220 230 240
RDHDRGREKH WQDRARVWPE NDWEREREFR DERAKTRDKR DRSK
Length:244
Mass (Da):29,230
Last modified:November 16, 2011 - v1
Checksum:i0A3F0552328A5744
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC127646 Genomic DNA. No translation available.
CH473973 Genomic DNA. Translation: EDM13583.1.
CH473973 Genomic DNA. Translation: EDM13584.1.
RefSeqiXP_006249387.1. XM_006249325.3.
UniGeneiRn.79076.

Genome annotation databases

EnsembliENSRNOT00000001402; ENSRNOP00000001402; ENSRNOG00000001060.
GeneIDi360803.

Similar proteinsi

Entry informationi

Entry nameiG3V639_RAT
AccessioniPrimary (citable) accession number: G3V639
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: September 27, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported