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Protein
Submitted name:

Spliceosome RNA helicase Ddx39b

Gene

Ddx39b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Spliceosome RNA helicase Ddx39bImported
Gene namesi
Name:Ddx39bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 17

Organism-specific databases

MGIiMGI:99240. Ddx39b.

PTM / Processingi

Proteomic databases

MaxQBiG3UXI6.
PaxDbiG3UXI6.
PeptideAtlasiG3UXI6.
PRIDEiG3UXI6.

Expressioni

Gene expression databases

BgeeiENSMUSG00000019432.
ExpressionAtlasiG3UXI6. baseline and differential.

Structurei

3D structure databases

SMRiG3UXI6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 148Helicase ATP-bindingInterPro annotationAdd BLAST148

Phylogenomic databases

eggNOGiKOG0329. Eukaryota.
COG0513. LUCA.
GeneTreeiENSGT00830000128348.

Family and domain databases

InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.

Sequencei

Sequence statusi: Fragment.

G3UXI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVLCQAKSG MGKTAVFVLA TLQQLEPVTG QVSVLVMCHT RELAFQISKE
60 70 80 90 100
YERFSKYMPN VKVAVFFGGL SIKKDEEVLK KNCPHIVVGT PGRILALARN
110 120 130 140
KSLNLKHIKH FILDECDKML EQLDMRRDVQ EIFRMTPHEK QVMMFSAT
Length:148
Mass (Da):16,899
Last modified:November 16, 2011 - v1
Checksum:iF86D8D4B360485B4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei148Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR974444 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000174757; ENSMUSP00000133705; ENSMUSG00000019432.

Similar proteinsi

Entry informationi

Entry nameiG3UXI6_MOUSE
AccessioniPrimary (citable) accession number: G3UXI6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: August 30, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported