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Protein
Submitted name:

Limb development membrane protein 1

Gene

LMBR1

Organism
Loxodonta africana (African elephant)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Limb development membrane protein 1Imported
Gene namesi
Name:LMBR1Imported
OrganismiLoxodonta africana (African elephant)Imported
Taxonomic identifieri9785 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaProboscideaElephantidaeLoxodonta
Proteomesi
  • UP000007646 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei32 – 54HelicalSequence analysisAdd BLAST23
Transmembranei74 – 96HelicalSequence analysisAdd BLAST23
Transmembranei175 – 205HelicalSequence analysisAdd BLAST31
Transmembranei225 – 250HelicalSequence analysisAdd BLAST26
Transmembranei270 – 287HelicalSequence analysisAdd BLAST18
Transmembranei307 – 330HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili138 – 168Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3722 Eukaryota
ENOG410YKEX LUCA
GeneTreeiENSGT00390000007809

Family and domain databases

InterProiView protein in InterPro
IPR008075 LIMR
IPR006876 LMBR1-like_membr_prot
PANTHERiPTHR12625 PTHR12625, 1 hit
PfamiView protein in Pfam
PF04791 LMBR1, 2 hits
PRINTSiPR01692 LIPOCALINIMR

Sequencei

Sequence statusi: Complete.

G3TX80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
IFPRLESQIK MPLSAFMVES IRKGIRARIL ETLVMLILLA LLILGIVWVA
60 70 80 90 100
SALIDNDAAS MESLYVDLWE FYLPYLYSCI SLMGCLLLLL CTPVGLSRMF
110 120 130 140 150
TVMGQLLVKP TILEDLDEQI YIITLEEEAL QRRLNGLSSS VEYNIRKLEQ
160 170 180 190 200
ELENVKNLKT KLERRKKASA WERNLVYPAV MVLLLIETSI SVLLVACNIL
210 220 230 240 250
CLLVDETAMP KGTRGPGIGN ASLSTFGFVG AALEIILIFY LMVSSVVGFY
260 270 280 290 300
SLRFFGNFTP KKDDTTMTKI IGNCVSILVL SSALPVMSRT LGITRFDLLG
310 320 330 340 350
DFGRFNWLGN FYIVLSYNLL FAIVTTLCLV RKFTSAVREE LFKALGLHKL
360 370
HLSNTPRDSE TTKPSANGRQ KTL
Length:373
Mass (Da):41,816
Last modified:November 16, 2011 - v1
Checksum:iD241D01A546EFA61
GO

Genome annotation databases

EnsembliENSLAFT00000036726; ENSLAFP00000020188; ENSLAFG00000017746

Similar proteinsi

Entry informationi

Entry nameiG3TX80_LOXAF
AccessioniPrimary (citable) accession number: G3TX80
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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