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Protein

POU domain protein

Gene

POU1F1

Organism
Loxodonta africana (African elephant)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi258 – 317HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
POU domain proteinUniRule annotation
Gene namesi
Name:POU1F1Imported
OrganismiLoxodonta africana (African elephant)Imported
Taxonomic identifieri9785 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaProboscideaElephantidaeLoxodonta
Proteomesi
  • UP000007646 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9785.ENSLAFP00000013903.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini168 – 242POU-specificInterPro annotationAdd BLAST75
Domaini256 – 316HomeoboxInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the POU transcription factor family.UniRule annotationSAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3802. Eukaryota.
ENOG410XQ7X. LUCA.
GeneTreeiENSGT00760000118935.
InParanoidiG3TH87.
OMAiMSCQPFT.
OrthoDBiEOG091G0U0S.
TreeFamiTF316413.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR010982. Lambda_DNA-bd_dom_sf.
IPR015586. Pit_1.
IPR013847. POU.
IPR000327. POU_dom.
PANTHERiPTHR11636:SF84. PTHR11636:SF84. 2 hits.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
PRINTSiPR00028. POUDOMAIN.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.

Sequencei

Sequence statusi: Complete.

G3TH87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KLSFGERWSS LFSYSLVGMS CQPFTSADTF IPLNSDSSAT LPLMMHHSAA
60 70 80 90 100
ECLPVSNHAT NVMSTVPSIL SLIQTPKCLR IHFLVTTLGN TATGLHYSVP
110 120 130 140 150
SCHYGNQAST YGVMAGSLTP CLYKFPDHTL SHGFPPMHQP LLAEDPTAAD
160 170 180 190 200
FKQELRRKSK LVEEPVDMDS PEIRELEKFA NEFKVRRIKL GYTQTNVGEA
210 220 230 240 250
LAAVHGSEFS QTTICRFENL QLSFKNACKL KAILSKWLEE AEQVGALYNE
260 270 280 290 300
KVGANERKRK RRTTISIAAK DALERHFGEQ NKPSSQEIMR MAEELNLEKE
310 320 330
VVRVWFCNRR QREKRVKTSL NQSLFTISKE HLECR
Length:335
Mass (Da):37,857
Last modified:November 16, 2011 - v1
Checksum:iBF65E29BCAB3EE9F
GO

Genome annotation databases

EnsembliENSLAFT00000016560; ENSLAFP00000013903; ENSLAFG00000016561.

Similar proteinsi

Entry informationi

Entry nameiG3TH87_LOXAF
AccessioniPrimary (citable) accession number: G3TH87
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported