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Protein
Submitted name:

Zinc finger CCHC-type containing 17

Gene

ZCCHC17

Organism
Loxodonta africana (African elephant)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger CCHC-type containing 17Imported
Gene namesi
Name:ZCCHC17Imported
OrganismiLoxodonta africana (African elephant)Imported
Taxonomic identifieri9785 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaProboscideaElephantidaeLoxodonta
Proteomesi
  • UP000007646 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9785.ENSLAFP00000012871.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 88S1 motifInterPro annotationAdd BLAST73
Domaini133 – 146CCHC-typeInterPro annotationAdd BLAST14

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili158 – 178Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410INHE. Eukaryota.
COG1185. LUCA.
GeneTreeiENSGT00510000047363.
InParanoidiG3TF02.
OMAiVWIKVIG.
OrthoDBiEOG091G0WQ8.
TreeFamiTF332136.

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR037320. pNO40.
IPR022967. S1_dom.
IPR003029. S1_domain.
IPR001878. Znf_CCHC.
IPR036875. Znf_CCHC_sf.
PANTHERiPTHR15838. PTHR15838. 1 hit.
PfamiView protein in Pfam
PF00575. S1. 1 hit.
SMARTiView protein in SMART
SM00316. S1. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS50126. S1. 1 hit.
PS50158. ZF_CCHC. 1 hit.

Sequencei

Sequence statusi: Complete.

G3TF02-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSGRPETME NLPALYTIFQ GEVAMVTDYG AFIKIPGCRK QGLVHRTHMS
60 70 80 90 100
SCRVDKPSEI VDVGDKVWVK LIGREMKNDR MKVSLSMKVV NQGTGKDLDP
110 120 130 140 150
NNVIIEQEER RRRSFQDYTG QKITLEAVLN TTCKKCGCKG HFAKDCFMQP
160 170 180 190 200
GGTKYSLIPD EEEEKEEAKS AAKSAEFEKP DPTKNSRKRK KEKKKKKHRD
210 220 230 240
RKSSDSDSSD SESETGKRAR HTSKDSKAAK KKKKKKKHKK KHKE
Length:244
Mass (Da):27,834
Last modified:November 16, 2011 - v1
Checksum:iF3A42C214426F34F
GO

Sequence databases

RefSeqiXP_003415498.1. XM_003415450.2.
XP_010593452.1. XM_010595150.1.

Genome annotation databases

EnsembliENSLAFT00000015362; ENSLAFP00000012871; ENSLAFG00000015364.
GeneIDi100662865.
KEGGilav:100662865.

Similar proteinsi

Entry informationi

Entry nameiG3TF02_LOXAF
AccessioniPrimary (citable) accession number: G3TF02
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: December 20, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported