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Protein
Submitted name:

T brachyury transcription factor

Gene

T

Organism
Loxodonta africana (African elephant)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T brachyury transcription factorImported
Gene namesi
Name:TImported
OrganismiLoxodonta africana (African elephant)Imported
Taxonomic identifieri9785 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaProboscideaElephantidaeLoxodonta
Proteomesi
  • UP000007646 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9785.ENSLAFP00000010453.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
GeneTreeiENSGT00760000118897.
InParanoidiG3T9J1.
OMAiAPSCVYI.
OrthoDBiEOG091G05OC.
TreeFamiTF106341.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01283. TBOX_1. 1 hit.
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

G3T9J1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSPGAESSG KSLQYRVDHL LSAVESELQA GSEKGDPTER ELHVGLEESE
60 70 80 90 100
LWVRFKELTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH
110 120 130 140 150
RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN
160 170 180 190 200
KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHCFPET QFIAVTAYQN
210 220 230 240 250
EEITALKIKY NPFAKAFLDA KESRSDHKDM MEEPGDSQQP GYSQSGGWLL
260 270 280 290 300
PGTSTLCPPG SPHPQFGGPL SLASTHGCER YPALRSHRAS PYPSPYTHHN
310 320 330 340 350
NSPAYSDNSP ACLSMLQSHD NWSSLGMPAH SSMLPVSHNS GPSTGSSQYP
360 370 380 390 400
NLWSVSNGAI TPGSQTPAMA NGLGAQFFRG SPAHYAPLTH AASASSGSPL
410 420 430
YEGGATATDI PDSQYDATAQ ARLVASWTPV SSPSM
Length:435
Mass (Da):47,063
Last modified:November 16, 2011 - v1
Checksum:i5D46CC8024C001A4
GO

Genome annotation databases

EnsembliENSLAFT00000012505; ENSLAFP00000010453; ENSLAFG00000012505.

Similar proteinsi

Entry informationi

Entry nameiG3T9J1_LOXAF
AccessioniPrimary (citable) accession number: G3T9J1
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: August 30, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported