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Protein
Submitted name:

Pentraxin 3

Gene

PTX3

Organism
Loxodonta africana (African elephant)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Pentraxin 3Imported
Gene namesi
Name:PTX3Imported
OrganismiLoxodonta africana (African elephant)Imported
Taxonomic identifieri9785 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaProboscideaElephantidaeLoxodonta
Proteomesi
  • UP000007646 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500345503118 – 383Sequence analysisAdd BLAST366

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9785.ENSLAFP00000009240.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini207 – 348LamGLInterPro annotationAdd BLAST142

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili108 – 139Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IHCT. Eukaryota.
ENOG410XRG6. LUCA.
GeneTreeiENSGT00760000119128.
InParanoidiG3T6R4.
OMAiWLPAGCE.
OrthoDBiEOG091G0AHP.
TreeFamiTF330208.

Family and domain databases

InterProiView protein in InterPro
IPR013320. ConA-like_dom_sf.
IPR006558. LamG-like.
IPR030476. Pentaxin_CS.
IPR001759. Pentraxin-related.
PfamiView protein in Pfam
PF00354. Pentaxin. 1 hit.
PRINTSiPR00895. PENTAXIN.
SMARTiView protein in SMART
SM00560. LamGL. 1 hit.
SM00159. PTX. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiView protein in PROSITE
PS00289. PTX_1. 1 hit.
PS51828. PTX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

G3T6R4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLPAILLCA FWAAASAAEN SEDCDLMFVN LDNEIDNGIP STEEPAPPCD
60 70 80 90 100
CRREHSEWDK LFIMLENSQM REGALQQAVD EVLRSDLQRL RAELGRLADS
110 120 130 140 150
LARTCGPAAS AEARLARALD ELLQASRDAG RRLARLEGAA PQRPEEAECA
160 170 180 190 200
LGAALEELQQ TRADLRVVQD WAARRLLPAG CETAILFPMR SKKIFGSVHP
210 220 230 240 250
MTPMRLGSFS ACLWVKATDV LNKTILFSYG TKRNPYEIQL YLSYQSTVLV
260 270 280 290 300
VGGEENKLIV DTVIPVGRWS HLCGTWASET GSASLWVNGE LAATTAEMAP
310 320 330 340 350
GHVVPEGGIL QIGQEKNGCC VGGGFDETLA FSGRVTGFNI WDHVLSPEEI
360 370 380
RETGGAESCH IRGNIVGWGV TEIQPHGGAQ YVL
Length:383
Mass (Da):41,710
Last modified:November 16, 2011 - v1
Checksum:i8A67D07390488F69
GO

Sequence databases

RefSeqiXP_010594233.1. XM_010595931.1.

Genome annotation databases

EnsembliENSLAFT00000011042; ENSLAFP00000009240; ENSLAFG00000011043.
GeneIDi104846442.
KEGGilav:104846442.

Similar proteinsi

Entry informationi

Entry nameiG3T6R4_LOXAF
AccessioniPrimary (citable) accession number: G3T6R4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 31, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported