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Protein
Submitted name:

Splicing factor 3b subunit 2

Gene

SF3B2

Organism
Gorilla gorilla gorilla (Western lowland gorilla)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Splicing factor 3b subunit 2Imported
Gene namesi
Name:SF3B2Imported
OrganismiGorilla gorilla gorilla (Western lowland gorilla)Imported
Taxonomic identifieri9595 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeGorilla
Proteomesi
  • UP000001519 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSGGOG00000028448.

Interactioni

Protein-protein interaction databases

STRINGi9593.ENSGGOP00000026965.

Structurei

3D structure databases

ProteinModelPortaliG3SFS9.
SMRiG3SFS9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 58SAPInterPro annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili140 – 167Sequence analysisAdd BLAST28
Coiled coili273 – 299Sequence analysisAdd BLAST27
Coiled coili533 – 556Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000006734.
InParanoidiG3SFS9.
KOiK12829.
OMAiMYRQFYR.
OrthoDBiEOG091G0A5N.
TreeFamiTF300635.

Family and domain databases

Gene3Di1.10.720.30. 1 hit.
1.25.10.10. 2 hits.
InterProiView protein in InterPro
IPR011989. ARM-like.
IPR007180. DUF382.
IPR006568. PSP_pro-rich.
IPR003034. SAP_dom.
IPR036361. SAP_dom_sf.
PfamiView protein in Pfam
PF04037. DUF382. 1 hit.
PF04046. PSP. 1 hit.
PF02037. SAP. 1 hit.
SMARTiView protein in SMART
SM00581. PSP. 1 hit.
SM00513. SAP. 1 hit.
PROSITEiView protein in PROSITE
PS50800. SAP. 1 hit.

Sequencei

Sequence statusi: Complete.

G3SFS9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATEHPEPPK AELQLPPPPP PGHYGAWAAQ ELQAKLAEIG APIQGNREEL
60 70 80 90 100
VERLQSYTRQ TGIVLNRPVL RGEDGDKAAP PPMSAQLPGI PMPPPPLGLP
110 120 130 140 150
PLQPPPPPPP PPPGLGLGFP MAHPPNLGPP PPLRVGEPVA LSEEERLKLA
160 170 180 190 200
QQQAALLMQQ EERAKQQGDH SLKEHELLEQ QKRAAVLLEQ ERQQEIAKMG
210 220 230 240 250
TPVPRPPQDM GQIGVRTPLG PRVAAPVGPV GPTPTVLPMG APVPRPRGPP
260 270 280 290 300
PPPGDENREM DDPSVGPKIP QALEKILQLK ESRQEEMNSQ QEEEEMETDA
310 320 330 340 350
RSSLGQSASE TEEDTVSVSK KEKNRKRRNR KKKKKPQRVR GVSSESSGDR
360 370 380 390 400
EKDSTRSRGS DSPAADVEIE YVTEEPEIYE PNFIFFKRIF EAFKLTDDVK
410 420 430 440 450
KEKEKEPEKL DKLENSAAPK KKGFEEEHKD SDDDSSDDEQ EKKPEAPKLS
460 470 480 490 500
KKKLRRMNRF TVAELKQLVA RPDVVEMHDV TAQDPKLLVH LKATRNSVPV
510 520 530 540 550
PRHWCFKRKY LQGKRGIEKP PFELPDFIKR TGIQEMREAL QEKEEQKTMK
560 570 580 590 600
SKMREKVRPK MGKIDIDYQK LHDAFFKWQT KPKLTIHGDL YYEGKEFETR
610 620 630 640 650
LKEKKPGDLS DELRISLGMP VGPNAHKVPP PWLIAMQRYG PPPSYPNLKI
660 670 680 690 700
PGLNSPIPES CSFGYHAGGW GKPPVDETGK PLYGDVFGTN AAEFQTKTEE
710 720 730 740 750
EEIDRTPWGE LEPSDEESSE EEEEEESDED KPDETGFITP ADSGLITPGG
760 770 780 790 800
FSSVPAGMET PELIELRKKK IEEAMDGSET PQLFTVLPEK RTATVGGAMM
810 820 830 840 850
GSTHIYDMST VMSRKGPAPE LQGVEVALAP EELELDPMAM TQKYEEHVRE
860 870 880 890
QQAQVEKEDF SDMVAEHAAK QKQKKRKAQP QDSRGGSKKY KEFKF
Length:895
Mass (Da):100,228
Last modified:November 16, 2011 - v1
Checksum:iD372AFA679443AD6
GO

Sequence databases

RefSeqiXP_004051619.1. XM_004051571.2.

Genome annotation databases

EnsembliENSGGOT00000022372; ENSGGOP00000026965; ENSGGOG00000028448.
GeneIDi101140573.
KEGGiggo:101140573.

Similar proteinsi

Entry informationi

Entry nameiG3SFS9_GORGO
AccessioniPrimary (citable) accession number: G3SFS9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: October 25, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported