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Protein
Submitted name:

Cleavage and polyadenylation specific factor 4

Gene

CPSF4

Organism
Gorilla gorilla gorilla (Western lowland gorilla)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri35 – 59C3H1-typePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri62 – 89C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri90 – 117C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri118 – 142C3H1-typePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri143 – 169C3H1-typePROSITE-ProRule annotationAdd BLAST27

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Cleavage and polyadenylation specific factor 4Imported
Gene namesi
Name:CPSF4Imported
OrganismiGorilla gorilla gorilla (Western lowland gorilla)Imported
Taxonomic identifieri9595 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeGorilla
Proteomesi
  • UP000001519 Componenti: Chromosome 7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSGGOG00000015131.

Interactioni

Protein-protein interaction databases

STRINGi9593.ENSGGOP00000014768.

Structurei

3D structure databases

ProteinModelPortaliG3RGL8.
SMRiG3RGL8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 59C3H1-typeInterPro annotationAdd BLAST25
Domaini62 – 89C3H1-typeInterPro annotationAdd BLAST28
Domaini90 – 117C3H1-typeInterPro annotationAdd BLAST28
Domaini118 – 142C3H1-typeInterPro annotationAdd BLAST25
Domaini143 – 169C3H1-typeInterPro annotationAdd BLAST27
Domaini245 – 260CCHC-typeInterPro annotationAdd BLAST16

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri35 – 59C3H1-typePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri62 – 89C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri90 – 117C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri118 – 142C3H1-typePROSITE-ProRule annotationAdd BLAST25
Zinc fingeri143 – 169C3H1-typePROSITE-ProRule annotationAdd BLAST27

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00390000009627.
InParanoidiG3RGL8.
OMAiANKCTKG.
OrthoDBiEOG091G0JUF.
TreeFamiTF314871.

Family and domain databases

InterProiView protein in InterPro
IPR000571. Znf_CCCH.
IPR036855. Znf_CCCH_sf.
IPR001878. Znf_CCHC.
IPR036875. Znf_CCHC_sf.
PfamiView protein in Pfam
PF00642. zf-CCCH. 1 hit.
PF00098. zf-CCHC. 1 hit.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 1 hit.
SM00356. ZnF_C3H1. 5 hits.
SUPFAMiSSF57756. SSF57756. 1 hit.
SSF90229. SSF90229. 2 hits.
PROSITEiView protein in PROSITE
PS50103. ZF_C3H1. 5 hits.
PS50158. ZF_CCHC. 1 hit.

Sequencei

Sequence statusi: Complete.

G3RGL8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQEIIASVDH IKFDLEIAVE QQLGAQPLPF PGMDKSGAAV CEFFLKAACG
60 70 80 90 100
KGGMCPFRHI SGEKTVVCKH WLRGLCKKGD QCEFLHEYDM TKMPECYFYS
110 120 130 140 150
KFGECSNKEC PFLHIDPESK IKDCPWYDRG FCKHGPLCRH RHTRRVICVN
160 170 180 190 200
YLVGFCPEGP SCKFMHPRFE LPMGTTEQPP LPQQTQPPAK QSNNPPLQRS
210 220 230 240 250
SSLIQLTSQN SSPNQQRTPQ VIGVMQSQNS SAGNRGPRPL EQVTCYKCGE
260
KGHYANRCTK GHLAFLSGQ
Length:269
Mass (Da):30,255
Last modified:November 16, 2011 - v1
Checksum:i49444E3EB840464A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABD030053247 Genomic DNA. No translation available.
RefSeqiXP_004045874.1. XM_004045826.2.

Genome annotation databases

EnsembliENSGGOT00000015186; ENSGGOP00000014768; ENSGGOG00000015131.
GeneIDi101136148.

Similar proteinsi

Entry informationi

Entry nameiG3RGL8_GORGO
AccessioniPrimary (citable) accession number: G3RGL8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported