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Protein
Submitted name:

TATA-box binding protein associated factor 5

Gene

TAF5

Organism
Gorilla gorilla gorilla (Western lowland gorilla)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
TATA-box binding protein associated factor 5Imported
Gene namesi
Name:TAF5Imported
OrganismiGorilla gorilla gorilla (Western lowland gorilla)Imported
Taxonomic identifieri9595 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeGorilla
Proteomesi
  • UP000001519 Componenti: Chromosome 10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSGGOG00000005443.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9593.ENSGGOP00000005330.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini92 – 124LisHInterPro annotationAdd BLAST33
Domaini466 – 507WD_REPEATS_REGIONInterPro annotationAdd BLAST42
Repeati466 – 507WDPROSITE-ProRule annotationAdd BLAST42
Domaini539 – 609WD_REPEATS_REGIONInterPro annotationAdd BLAST71
Repeati539 – 574WDPROSITE-ProRule annotationAdd BLAST36
Repeati581 – 609WDPROSITE-ProRule annotationAdd BLAST29

Keywords - Domaini

RepeatSAAS annotation, WD repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00900000140924.
InParanoidiG3QRR7.
OMAiMERIEVY.
OrthoDBiEOG091G03SP.
TreeFamiTF300669.

Family and domain databases

CDDicd08044. TAF5_NTD2. 1 hit.
InterProiView protein in InterPro
IPR006594. LisH.
IPR007582. TFIID_NTD2.
IPR037264. TFIID_NTD2_sf.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF04494. TFIID_NTD2. 1 hit.
PF00400. WD40. 3 hits.
SMARTiView protein in SMART
SM00320. WD40. 3 hits.
SUPFAMiSSF160897. SSF160897. 1 hit.
SSF50978. SSF50978. 2 hits.
PROSITEiView protein in PROSITE
PS50896. LISH. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 2 hits.

Sequencei

Sequence statusi: Complete.

G3QRR7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAALAEEQTE VAVKLEPEGP PTLLPPQAGD GAGEGSGGTT NNGPNGGGGN
60 70 80 90 100
VAASSSTGGD GGTPKPTVAV SAAAPAGAAP VPAAAPDAGA PHDRQTLLAV
110 120 130 140 150
LQFLRQSKLR EAEEALRREA GLLEEAVAGS GAPGEVDSAG AEVTSALLSR
160 170 180 190 200
VTASAPGPAA PDPPGTGASG ATVVSGSASG PAAPGKVGSV AVEDQPDVSA
210 220 230 240 250
VLSAYNQQGD PTMYEEYYSG LKHFIECSLD CHRAELSQLF YPLFVHMYLE
260 270 280 290 300
LVYNQHENEA KSFFEKFHGD QECYYQDDLR VLSSLTKKEH MKGNETMLDF
310 320 330 340 350
RTSKFVLRIS RDSYQLLKRH LQEKQNNQIW NIVQEHLYID IFDGMPRSKQ
360 370 380 390 400
QIDAMVGSLA GEAKREANKS KVFFGLLKEP EIEVPLDDED EEGENEEGKP
410 420 430 440 450
KKKKPKKDSI GSKSKKQDPN APPQNRIPLP ELKDSDKLDK IMNMKETTKR
460 470 480 490 500
VRLGPDCLPS ICFYTFLNAY QGLTAVDVTD DSSLIAGGFA DSTVRVWSVT
510 520 530 540 550
PKKLRSVKQA SDLSLIDKES DDVLERIMDE KTASELKILY GHSGPVYGAS
560 570 580 590 600
FSPDRNYLLS SSEDGTVRLW SLQTFTCLVG YKGHNYPVWD TQFSPYGYYF

VSGGHDRVA
Length:609
Mass (Da):65,699
Last modified:November 16, 2011 - v1
Checksum:i850B4B1F71F3C2F2
GO

Genome annotation databases

EnsembliENSGGOT00000005471; ENSGGOP00000005330; ENSGGOG00000005443.

Similar proteinsi

Entry informationi

Entry nameiG3QRR7_GORGO
AccessioniPrimary (citable) accession number: G3QRR7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: November 22, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported