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Protein
Submitted name:

Two pore segment channel 1

Gene
N/A
Organism
Gasterosteus aculeatus (Three-spined stickleback)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Two pore segment channel 1Imported
OrganismiGasterosteus aculeatus (Three-spined stickleback)Imported
Taxonomic identifieri69293 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaPerciformesCottioideiGasterostealesGasterosteidaeGasterosteus
Proteomesi
  • UP000007635 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei110 – 134HelicalSequence analysisAdd BLAST25
Transmembranei140 – 159HelicalSequence analysisAdd BLAST20
Transmembranei180 – 199HelicalSequence analysisAdd BLAST20
Transmembranei235 – 257HelicalSequence analysisAdd BLAST23
Transmembranei264 – 283HelicalSequence analysisAdd BLAST20
Transmembranei303 – 326HelicalSequence analysisAdd BLAST24
Transmembranei448 – 468HelicalSequence analysisAdd BLAST21
Transmembranei480 – 498HelicalSequence analysisAdd BLAST19
Transmembranei510 – 528HelicalSequence analysisAdd BLAST19
Transmembranei570 – 589HelicalSequence analysisAdd BLAST20
Transmembranei669 – 694HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini111 – 331Ion_transInterPro annotationAdd BLAST221
Domaini444 – 693Ion_transInterPro annotationAdd BLAST250

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410INF7. Eukaryota.
ENOG410XZT8. LUCA.
GeneTreeiENSGT00530000063660.
InParanoidiG3P4R1.
OMAiWLGFHTF.
TreeFamiTF328550.

Family and domain databases

InterProiView protein in InterPro
IPR005821. Ion_trans_dom.
IPR028801. TPC1.
PANTHERiPTHR10037:SF231. PTHR10037:SF231. 1 hit.
PfamiView protein in Pfam
PF00520. Ion_trans. 2 hits.

Sequencei

Sequence statusi: Complete.

G3P4R1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPDDDDVPL ILTWDDANSG LLSEDAERGD ENHPHRDGGG GHYDIVNNAV
60 70 80 90 100
NSAPGPPNHR AQNVSLRQSW EMNYQEAAIY LQEGENNDKF FTHPRNPKAL
110 120 130 140 150
AAYLFAHNHL FYMMELLTGL LLMMLSLCEA PAVPSLRLDV YVHATLELLA
160 170 180 190 200
LVMVAFELCM KLRWLGFHTF IRHKRTMVKA CVLLLQFVEA IVVLIRQTSH
210 220 230 240 250
VRVTRALRPI FLVDCRYCGA VRRNLRQIFQ SLPPFIDILL LLLFFMVIFA
260 270 280 290 300
ILGFCLFSPN TADPYFSTLE NSLVSLFVLV TTANFPDVMM PAYSKNRWSC
310 320 330 340 350
VFFIVYLSIE LYFVMNLLLA VVFDTFNDVE KMKFKSLLLH KRSAIDHAFQ
360 370 380 390 400
LLVSRQRPMG VSLKQFDGLM RFYRPRMSAR DRFLTYKALN TSGAPMLSLQ
410 420 430 440 450
DFYKFYEVTG LKWKPRRSGE HWFDDLPQTS FLIFKGINIL VKSKAFQYVM
460 470 480 490 500
YVVVAINGVW ILVETYTLNS GFSWSRFVPW SYIVFLTIYG VEVLLKITGL
510 520 530 540 550
GPMAYFSSGW NLFDFSVTVF AFLGLIALAF DMEPFYFIVV LRPFQLLRLF
560 570 580 590 600
KIKQRYRNVL DTMFELFPRM ASLGLTLIIF YYSFAIVGME FFADVVYPNC
610 620 630 640 650
CNTSTVADSY RQINVTYGNK TVLEEGYYYL NNFNNILSSF VTLFELTVVN
660 670 680 690 700
NWYITMEGVT SMTTHWSRLY FMTFYIVTMV VMTIIVAFIL DAFVFRMNYS
710 720 730 740 750
RKNREPVENP EDENGIVFEV EVSRDEALTT LELYKQTCPG LSSLNSLQGV
760 770 780 790 800
LQTMDRGGHS SMVYLGRRSR TKSDLSMKMY EEEIQHEWYT EYSREDLAER
810 820 830
EQCPEQEPDS PVSLPSSFPE PQLNSQTGPH SVN
Length:833
Mass (Da):96,353
Last modified:November 16, 2011 - v1
Checksum:i01FCB51325DD054A
GO

Genome annotation databases

EnsembliENSGACT00000012608; ENSGACP00000012584; ENSGACG00000009537.

Similar proteinsi

Entry informationi

Entry nameiG3P4R1_GASAC
AccessioniPrimary (citable) accession number: G3P4R1
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: October 25, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported