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Protein
Submitted name:

PHD finger protein 21Ab

Gene
N/A
Organism
Gasterosteus aculeatus (Three-spined stickleback)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AbImported
OrganismiGasterosteus aculeatus (Three-spined stickleback)Imported
Taxonomic identifieri69293 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaPerciformesCottioideiGasterostealesGasterosteidaeGasterosteus
Proteomesi
  • UP000007635 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi69293.ENSGACP00000010464.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini467 – 514PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili541 – 579Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IREA. Eukaryota.
ENOG41112YM. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiG3NYP3.
OMAiHEDFCTV.
TreeFamiTF331518.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

G3NYP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQMLQEAL KVEIQIHQQK LVAQMKQDPQ NADLKKQLHE LQAKITALSE
60 70 80 90 100
KQQKKVVEQL RKELLVKQEP DAKLQLHVQT PPAGGDMKPG NLLQSQQIPG
110 120 130 140 150
GLQQNSWHYP RLRVPVMKMR ICLQTLAVTP VLTAKTIPLV LKAAAAPPGS
160 170 180 190 200
VLPHRPPAVA MVTTAIPKPD LQNAPINLQV VSKLTNQSSE PVRLVSKNAM
210 220 230 240 250
VTVTSSCAQP IKVPQFVPPP RLMPRPTFQP QVRPKPATPT NVHIAPAPPP
260 270 280 290 300
PMMAAPQLLQ RPVMLATKLS SSLPSAPPIH QVRIVNGQPC GKAGAAPLTG
310 320 330 340 350
IVITTPVTAS PARLASPAQV LGLTPILTPT PAKPIQISSL IAEPKVGDPP
360 370 380 390 400
PPPRTKKEEN PEKLAFMVSL GLVTHDHLEE IQSKRQERKR RTTANPVYSG
410 420 430 440 450
AVFEPERKKS AVSYLNSPLH QGTRKRGRPP KYSSVPELGC LTPTSPSSPV
460 470 480 490 500
RPLPLPSPSS GDGDIHEDFC TVCRRSGQLL MCDTCSRVYH LDCLDPPLKT
510 520 530 540 550
IPKGMWICPK CQDQILKKEE AIPWPGTLAI VHSYIAYKEA KEEEKQKLMK
560 570 580 590 600
WSAELKLERE QLEQRVKQLS NSITKCMETK NSILARQKDM HLSLEKVKHL

IRLI
Length:604
Mass (Da):66,598
Last modified:November 16, 2011 - v1
Checksum:i1A1155D079041D97
GO

Genome annotation databases

EnsembliENSGACT00000010486; ENSGACP00000010464; ENSGACG00000007895.

Similar proteinsi

Entry informationi

Entry nameiG3NYP3_GASAC
AccessioniPrimary (citable) accession number: G3NYP3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: August 30, 2017
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported