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Protein
Submitted name:

T, brachyury homolog b

Gene
N/A
Organism
Gasterosteus aculeatus (Three-spined stickleback)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T, brachyury homolog bImported
OrganismiGasterosteus aculeatus (Three-spined stickleback)Imported
Taxonomic identifieri69293 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaPerciformesCottioideiGasterostealesGasterosteidaeGasterosteus
Proteomesi
  • UP000007635 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi69293.ENSGACP00000006962.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
GeneTreeiENSGT00760000118897.
InParanoidiG3NNP8.
OMAiAPSCVYI.
TreeFamiTF106341.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01283. TBOX_1. 1 hit.
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

G3NNP8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGASECPG KAGQKRVDHL LSAVESELQA GSEKGDPTEK GLKVSLDDDE
60 70 80 90 100
LWRTFKDLTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVSGDNH
110 120 130 140 150
RWKYVNGEWV PGGKPEPQTP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN
160 170 180 190 200
KLNGAGQIML NSLHKYEPRV HVLRVGGPRR MISSHSFPET HFIAVTAYQN
210 220 230 240 250
EITALKIKHN PFAKAFLDAK ERSDHKDMRE DAVENQQSAY SQFARLVPSR
260 270 280 290 300
LPLLCGTSRP PASPKCQFGG PRLLSPHSVE RYSPLGNPRS SPYAGPYAPR
310 320 330 340 350
TNWPVSYSDN SPACLSMLSS HESWSSLQIP THSCMMDTSA TSSSMSLHSQ
360 370 380 390 400
YTSLWSVSNS PLTPVSQNGG INTSLSSQFL RGPSSHYPSP GHSAAAPSSG
410 420 430
SPMYERAAAT EVQDAAEYDA ALHGRLPLAW TPATPPSL
Length:438
Mass (Da):47,861
Last modified:November 16, 2011 - v1
Checksum:i742D4E999998F39F
GO

Genome annotation databases

EnsembliENSGACT00000006980; ENSGACP00000006962; ENSGACG00000005258.

Similar proteinsi

Entry informationi

Entry nameiG3NNP8_GASAC
AccessioniPrimary (citable) accession number: G3NNP8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: August 30, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported