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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Gasterosteus aculeatus (Three-spined stickleback)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiGasterosteus aculeatus (Three-spined stickleback)Imported
Taxonomic identifieri69293 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaPerciformesCottioideiGasterostealesGasterosteidaeGasterosteus
Proteomesi
  • UP000007635 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi69293.ENSGACP00000003346.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini118 – 151CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini173 – 202C2H2-typeInterPro annotationAdd BLAST30
Domaini203 – 226C2H2-typeInterPro annotationAdd BLAST24
Domaini290 – 317C2H2-typeInterPro annotationAdd BLAST28
Domaini511 – 544CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini637 – 670CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini773 – 806CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini1034 – 1067CCHC FOG-typeInterPro annotationAdd BLAST34

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiG3NDE6.
OMAiYSCPAAP.
TreeFamiTF331342.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 10 hits.
SUPFAMiSSF57667. SSF57667. 6 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.

Sequencei

Sequence statusi: Fragment.

G3NDE6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AQQSRLTLAC DDPDCWISRL PLTCDVSAAN CTIYSQGEQL FCKVSRELTA
60 70 80 90 100
GEGLLASLSP PPSSSSSSPL SRLSPPLSLV TQKQAVVKDE TLYSPALRSE
110 120 130 140 150
IQLLPQQAGM AAILATAVVN KDIFPCKDCG IWYRSERNLQ AHLMYYCASR
160 170 180 190 200
QKQPPAASSP PQDKPKESYP NERICPFPQC NKSCPSASSL EIHMRTHSGE
210 220 230 240 250
RPFVCLICLS AFTTKANCER HLKVHTDTLN GVCHGCGFVS TTRDILYSHL
260 270 280 290 300
VTSHMVCQPG SRSEVYSPGP GLPKLPISTG LSPGDSGVVL KCQVCGHNSD
310 320 330 340 350
SPAQLQQHVR THLEVRVPTE RSPNPRQSTP SSVDHPQLSP HEREPLGCVP
360 370 380 390 400
SPDSSSPGAN GGSAPPRDSS PPNAQTTDLK IKEEPHSDSD AEEQQMEIME
410 420 430 440 450
GGEKDEATSS CATSTSPKSP ATASVKAEPT SPTPGSSPAH EGGTGSVLPG
460 470 480 490 500
GAMFLPQYMF NPEAAIMPQA SEILAKMSEM HSRLKQGQAV PQNNPPAFFP
510 520 530 540 550
SGQTAPTAAA TPPHKGATCF ECDITFNNIN NFYAHKRLYC SSRHHGEGAT
560 570 580 590 600
SASGPGSTRD AAPATMPRGS PTSPQGGAAS RAASASPTES DPPAESGATE
610 620 630 640 650
PKRVVEIKTE TSREGISSSS ASEGSQSPAS GSAEDQEDDP NRTFCQACNI
660 670 680 690 700
RFSRHENYTV HKRFYCASRH DPSNHRAVHM AKATTPAAFL PQPIRKRKRK
710 720 730 740 750
KMYEIHMART EALAMAASAP SPSVLGLAVK QEVSPSEEDS SSPEGDGPID
760 770 780 790 800
LSKRPRLRVV PRHSSSSSIL PALPLTDYHK CTACSISFNS IENYLAHKTY
810 820 830 840 850
YCPATTLQPH TLEQLHRLKS SASTSPKSRP AQERTDHLHP VEAKALPAEW
860 870 880 890 900
VSQAQSSSPH PSALPSSDAT SPAVCPYCPN RLITCDLMEH FKTTHGLVVT
910 920 930 940 950
VQPTQPGSVV SRSPSLSPRD GTAATTSTTP MSHSRLVSRV HRDSINGQAR
960 970 980 990 1000
SSTTSPVSPL VNGSPSAGGG SPLAGSPLPP SPPRAPSLTL SPVPEVLRGT
1010 1020 1030 1040 1050
VGLSPDNAVP TVTSHPIATA PPAPGPKSTV ISPVLNGNSR FCRLCNIKFS
1060 1070
SLSTFIAHKK YYCSSHSAEH VK
Length:1,072
Mass (Da):113,993
Last modified:November 16, 2011 - v1
Checksum:iFAA622D7EA9F420B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Genome annotation databases

EnsembliENSGACT00000003357; ENSGACP00000003346; ENSGACG00000002554.

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi69293.ENSGACP00000003346.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGACT00000003357; ENSGACP00000003346; ENSGACG00000002554.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiG3NDE6.
OMAiYSCPAAP.
TreeFamiTF331342.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 10 hits.
SUPFAMiSSF57667. SSF57667. 6 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiG3NDE6_GASAC
AccessioniPrimary (citable) accession number: G3NDE6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 10, 2017
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.