Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative RNA exonuclease NEF-sp

Gene

I79_020587

Organism
Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionExonucleaseImported, Hydrolase, Nuclease, RNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative RNA exonuclease NEF-spImported
Gene namesi
ORF Names:I79_020587Imported
OrganismiCricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)Imported
Taxonomic identifieri10029 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeCricetulus
Proteomesi
  • UP000001075 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiG3IAG4

Structurei

3D structure databases

ProteinModelPortaliG3IAG4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini496 – 570RRMInterPro annotationAdd BLAST75
Domaini591 – 661RRMInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili380 – 400Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiG3IAG4
KOiK14570

Family and domain databases

CDDicd06145 REX1_like, 1 hit
Gene3Di3.30.420.10, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR013520 Exonuclease_RNaseT/DNA_pol3
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034922 REX1-like_exo
IPR012337 RNaseH-like_sf
IPR036397 RNaseH_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00929 RNase_T, 1 hit
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00479 EXOIII, 1 hit
SM00360 RRM, 2 hits
SUPFAMiSSF53098 SSF53098, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

G3IAG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQETEAVPR KRKEADSALA TELGRPPWDL EDKQPKAKKA RLSTILFPET
60 70 80 90 100
CEVTHRQLCE LLKYAVLGKS TVPKPSWCQL LHPNHLSSVV IFILKGMSQL
110 120 130 140 150
HFYKFYLEFR FLRKTFKHKF SLPPPTSDFL FDIIGLQKKK STRGFPRTIE
160 170 180 190 200
GPLMSAVLKS STNLQNDPII QKYGCEKVGL TRCLLTKEEM KTFHFPLEGS
210 220 230 240 250
PNCENFILTK CDGSITDSSP LFGLDCEMCL TSKGRELTHI SLVAEGGHCI
260 270 280 290 300
MDELVKPDFK ILNYLTSFSG ITKKILNPVT TKLKDVQKLL RKLLPPDAVL
310 320 330 340 350
VGHSLDSDLR VLQMIHPYVI DTSLLYAGKQ GRRFKLRFLA KVILGKDMQC
360 370 380 390 400
PDKVGHDTIE DARTTLELTR YFLKNGPKKI AELNLEALAS HEELKAASQE
410 420 430 440 450
PGNKGGPTEC PNMSVLECLD SVGQKLLFLT RDIDELSSSR NCQTIRCSSN
460 470 480 490 500
KEVLEQARVE VPLFPFNIVQ FSFKPFSPIL AEEMKKRMKT KWTEMSTVYA
510 520 530 540 550
GPFIKNCNIE AVKKMFNSLG PVESITLVLE TYMPHFCIQY EVLEAAQLAI
560 570 580 590 600
ETMNGILVED SYIRVHRPVT EFTLECDILV HELEQDSENQ GIIYVAGLGE
610 620 630 640 650
TFKEHLLDQS SLFPGLEAVI LPKDVKSRKQ KNYCFLKFKT RDNAQVALEI
660 670 680 690 700
FKGKDWKLKG RHALTPRHLQ AWLKDIHPEP ATPSGLQIVP PLLEKHVFQT
710 720 730 740 750
LKENHAKIVA WRCNQRIERL YHSLSPGTLC LILLPGTKNT FGSHPGLGLM
760
KIKEEENDTP GLGV
Length:764
Mass (Da):86,514
Last modified:November 16, 2011 - v1
Checksum:i8384626A36E97BDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH001707 Genomic DNA Translation: EGV98866.1
RefSeqiXP_003511993.1, XM_003511945.3
XP_007632847.1, XM_007634657.2
XP_007632848.1, XM_007634658.2
XP_007632849.1, XM_007634659.2

Genome annotation databases

EnsembliENSCGRT00001019862; ENSCGRP00001015619; ENSCGRG00001016179
GeneIDi100751890
KEGGicge:100751890

Similar proteinsi

Entry informationi

Entry nameiG3IAG4_CRIGR
AccessioniPrimary (citable) accession number: G3IAG4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 23, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health