Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Lamin-B2

Gene

I79_013862

Organism
Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Lamin-B2Imported
Gene namesi
ORF Names:I79_013862Imported
OrganismiCricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)Imported
Taxonomic identifieri10029 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeCricetulus
Proteomesi
  • UP000001075 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliG3HSM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini448 – 551LTDInterPro annotationAdd BLAST104

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili21 – 62Sequence analysisAdd BLAST42
Coiled coili71 – 119Sequence analysisAdd BLAST49
Coiled coili141 – 196Sequence analysisAdd BLAST56
Coiled coili278 – 355Sequence analysisAdd BLAST78

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

InParanoidiG3HSM8.
KOiK07611.

Family and domain databases

Gene3Di2.60.40.1260. 1 hit.
InterProiView protein in InterPro
IPR001664. IF.
IPR018039. Intermediate_filament_CS.
IPR001322. Lamin_tail_dom.
IPR036415. Lamin_tail_dom_sf.
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiView protein in Pfam
PF00038. Filament. 1 hit.
PF00932. LTD. 1 hit.
SMARTiView protein in SMART
SM01391. Filament. 1 hit.
SUPFAMiSSF74853. SSF74853. 1 hit.
PROSITEiView protein in PROSITE
PS00226. IF. 1 hit.

Sequencei

Sequence statusi: Complete.

G3HSM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLPPRAGP ATPLSPARLS RLQEKEELRE LNDRLAHYID RVRALELEND
60 70 80 90 100
RLLLRISEKE EVTTREVSGI KALYESELAD ARRVLDETAR ERARLQIEMG
110 120 130 140 150
KLQAELDEAR KSAKKREGEL TVAQGRVKDL ESLFHRSEAE LASTLSDKHG
160 170 180 190 200
LENDVAELRA QLAKAEDGHA VAKKQLEKET LMRVDLENRC QSLQEELGFS
210 220 230 240 250
KSVFEEEVRE TRRRHERRLV EVDSSRQQEY DFKMAQALGD LRSQHDEQLR
260 270 280 290 300
LYRLELEQTY QAKLDNAKLS SDQNDKAASA AREELKEARM RVESLSYQLS
310 320 330 340 350
GLQKQASAAE DRIRELEEAV AGERDKFRKM LDAKEQEMTE VRDAMQQQLA
360 370 380 390 400
EYQELLDIKL ALDMEISAYR KLLEGEEERL KLSPSPSSRV TISRATSSSS
410 420 430 440 450
SSGVGMSVGR GRSKRRRLET EETQGSRSSG SGSSTGSGSR LAQQAPVPAV
460 470 480 490 500
VSIDEVDLEG RFVRLKNASD KDQSLGNWRI KRQVPEGEDI AYKFTPKYVL
510 520 530 540 550
RAGQTVTVWA SGAGVIHSPP STLVWKSQSS WGCGESSRTV LVNADGEEVA
560 570 580 590 600
VQAVKQTSVQ VSENGEEEEE EEEEAAEAEF GEEDLFHQQG DPRTTSRGCR

LM
Length:602
Mass (Da):67,733
Last modified:November 16, 2011 - v1
Checksum:iB7D6496C72FA9866
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH000665 Genomic DNA. Translation: EGW03149.1.
RefSeqiXP_003506506.1. XM_003506458.2.

Genome annotation databases

EnsembliENSCGRT00000007040; ENSCGRP00000006926; ENSCGRG00000005049.
GeneIDi100766421.
KEGGicge:100766421.

Similar proteinsi

Entry informationi

Entry nameiG3HSM8_CRIGR
AccessioniPrimary (citable) accession number: G3HSM8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: November 22, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported