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Protein

Adenosylmethionine decarboxylase

Gene

speD

Organism
Flavobacterium branchiophilum (strain FL-15)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

S-adenosyl-L-methionine = S-adenosyl 3-(methylthio)propylamine + CO2.SAAS annotation

Pathway: S-adenosylmethioninamine biosynthesis

This protein is involved in step 1 of the subpathway that synthesizes S-adenosylmethioninamine from S-adenosyl-L-methionine.SAAS annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Adenosylmethionine decarboxylase (speD)
This subpathway is part of the pathway S-adenosylmethioninamine biosynthesis, which is itself part of Amine and polyamine biosynthesis.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes S-adenosylmethioninamine from S-adenosyl-L-methionine, the pathway S-adenosylmethioninamine biosynthesis and in Amine and polyamine biosynthesis.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Keywords - Biological processi

Spermidine biosynthesisSAAS annotation

Keywords - Ligandi

S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciFBRA1034807:GHGD-534-MONOMER.
UniPathwayiUPA00331; UER00451.

Names & Taxonomyi

Protein namesi
Recommended name:
Adenosylmethionine decarboxylaseSAAS annotation (EC:4.1.1.50SAAS annotation)
Gene namesi
Name:speDImported
Ordered Locus Names:FBFL15_0534Imported
OrganismiFlavobacterium branchiophilum (strain FL-15)Imported
Taxonomic identifieri1034807 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
ProteomesiUP000009186 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1034807.FBFL15_0534.

Family & Domainsi

Phylogenomic databases

KOiK01611.
OMAiHTWPEFN.

Family and domain databases

Gene3Di3.60.90.10. 1 hit.
InterProiIPR003826. AdoMetDC_fam_prok.
IPR016067. S-AdoMet_deCO2ase_core.
[Graphical view]
PfamiPF02675. AdoMet_dc. 1 hit.
[Graphical view]
SUPFAMiSSF56276. SSF56276. 1 hit.

Sequencei

Sequence statusi: Complete.

G2Z5D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTIDYSPGL HKLLTLHVKN TEKLINSAAF QLFTDAILLE NNLHQVGIVL
60 70 80 90 100
HHFENESFTI AVCLKESHIC MHTWPEFNQL TLDIYLCNYQ KDNSHLVQSI
110 120
AQKYTEYFEA TIIKDIEINR
Length:120
Mass (Da):13,991
Last modified:November 16, 2011 - v1
Checksum:i06708A3E89B9AB45
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ859183 Genomic DNA. Translation: CCB68648.1.
RefSeqiWP_014083128.1. NC_016001.1.
YP_004842885.1. NC_016001.1.

Genome annotation databases

EnsemblBacteriaiCCB68648; CCB68648; FBFL15_0534.
KEGGifbr:FBFL15_0534.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ859183 Genomic DNA. Translation: CCB68648.1.
RefSeqiWP_014083128.1. NC_016001.1.
YP_004842885.1. NC_016001.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1034807.FBFL15_0534.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCB68648; CCB68648; FBFL15_0534.
KEGGifbr:FBFL15_0534.

Phylogenomic databases

KOiK01611.
OMAiHTWPEFN.

Enzyme and pathway databases

UniPathwayiUPA00331; UER00451.
BioCyciFBRA1034807:GHGD-534-MONOMER.

Family and domain databases

Gene3Di3.60.90.10. 1 hit.
InterProiIPR003826. AdoMetDC_fam_prok.
IPR016067. S-AdoMet_deCO2ase_core.
[Graphical view]
PfamiPF02675. AdoMet_dc. 1 hit.
[Graphical view]
SUPFAMiSSF56276. SSF56276. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FL-15Imported.

Entry informationi

Entry nameiG2Z5D6_FLABF
AccessioniPrimary (citable) accession number: G2Z5D6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 24, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.