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G2TNM4 (G2TNM4_BACCO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Bcoa_3020 EMBL AEP02196.1
OrganismBacillus coagulans 36D1 EMBL AEP02196.1
Taxonomic identifier345219 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length668 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G2TNM4 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: A4BF4AFD09A6424C

FASTA66872,852
        10         20         30         40         50         60 
MFDKTDELAV TTIRTLSIDA IEKAKSGHPG LPMGAAPMAY TLWTRYLNHN PENPHWFNRD 

        70         80         90        100        110        120 
RFVLSAGHGS MLLYSLLHLS GYALSMDDIK NFRQYGSKTP GHPEYGHTEG VEATTGPLGQ 

       130        140        150        160        170        180 
GIAMSVGMAM AERHLAAVYN KENFPVIDHY TYALCGDGDL MEGVSAEAAS LAGHLKLGRL 

       190        200        210        220        230        240 
IVLYDSNDIS LDGDLNKAFS ESVADRFKAY GWQYLRVEDG NDMAQVAKAI EEAKADTSRP 

       250        260        270        280        290        300 
TLIEVKTIIG YGSPNKSGKS AAHGAPLGED ELKLTKEAYK WTFEEDFYVP DEVYARFREL 

       310        320        330        340        350        360 
VVENGVKKEQ EWASLFEAYE KQYPQLAAEL KQAIKGGLPD GWDKDIPVYE EGKTLASRAA 

       370        380        390        400        410        420 
SGEVLNAVSK HLPSLFGGSA DLAGSNNTRL KEDKDYMPDA YEGRNIWFGV REFAMGAAMN 

       430        440        450        460        470        480 
GMALHGGVHV YGGTFFVFSD YLRPAIRLAA LMGLPVTYVF THDSIAVGED GPTHEPVEQL 

       490        500        510        520        530        540 
PSLRAMPGLS VIRPADGNET AAAWRLALSS ENHPTALVLT RQGLPTLKGT SEKALEGVSK 

       550        560        570        580        590        600 
GAYVVSPAQK ETADVLLLAS GSEVHLAVLA QQQLAEQKID AAVVSMPSWD RFEQQSKAYK 

       610        620        630        640        650        660 
ESVLPAQVKK RLAIEMASPF GWERYTGDEG DILSVNTFGA SGNGKTVMEK YGFTVENVVA 


RVKKLLGM 

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References

[1]"Complete Genome Sequence of a thermotolerant sporogenic lactic acid bacterium, Bacillus coagulans strain 36D1."
Rhee M.S., Moritz B.E., Xie G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Chertkov O., Brettin T., Han C., Detter C., Pitluck S., Richardson P. expand/collapse author list , Land M.L., Patel M., Ou M., Harbrucker R., Ingram L.O., Shanmugam K.T.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 36D1 EMBL AEP02196.1.
[2]Shanmugan K.T.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 36D1 EMBL AEP02196.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003056 Genomic DNA. Translation: AEP02196.1.
RefSeqYP_004860976.1. NC_016023.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEP02196; AEP02196; Bcoa_3020.
GeneID11173949.
KEGGbag:Bcoa_3020.

Phylogenomic databases

KOK00615.

Enzyme and pathway databases

BioCycBCOA345219:GH5A-2985-MONOMER.

Family and domain databases

Gene3D3.40.50.920. 1 hit.
InterProIPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR015941. Transketolase-like_C.
IPR005475. Transketolase-like_Pyr-bd.
IPR005478. Transketolase_bac-like.
IPR020826. Transketolase_BS.
IPR005476. Transketolase_C.
IPR005474. Transketolase_N.
[Graphical view]
PfamPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
PF00456. Transketolase_N. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52922. Transketo_C_like. 1 hit.
TIGRFAMsTIGR00232. tktlase_bact. 1 hit.
PROSITEPS00801. TRANSKETOLASE_1. 1 hit.
PS00802. TRANSKETOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2TNM4_BACCO
AccessionPrimary (citable) accession number: G2TNM4
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)