G2T421 (G2T421_ROSHA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GntR domain protein EMBL AEN97466.1

Gene names

Ordered Locus Names:

RHOM_11790 EMBL AEN97466.1

Organism

Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) [Complete proteome] [HAMAP]

Taxonomic identifier

585394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Lachnospiraceae › Roseburia › Roseburia hominis

Protein attributes

Sequence length	225 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. RuleBase RU000706 SAAS SAAS011711

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000706 SAAS SAAS011711
Ligand	DNA-binding RuleBase RU000706 SAAS SAAS011711
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G2T421 [UniParc]. Last modified November 16, 2011. Version 1. Checksum: 4FC5468E8E3226D3	FASTA	225	26,047
	10 20 30 40 50 60 MTEDLTLNMN AYLPLRDVVF NTLREAILKG ELKPGERLME LQLAAKLGVS RTPIREAIRM 70 80 90 100 110 120 LEQEGLAVTI PRKGAEVARM TEKDMEDVLQ IRDALDELAA SIACEQISEE ELAELRHTMH 130 140 150 160 170 180 EFEESTKTGD VKRIAEADVR FHDIIYHATR NVKLENMLNN LREQMYRYRV EYLKDEKNFP 190 200 210 220 ILIREHSQIV EGLTAKDKTM LTAAMHKHVM NQATAVKEMI REQEK

References

[1]

"Bi-directional cross-talk between a Clostridium symbiont, Roseburia hominis, the gut immune system and appetite regulation." Mulder I.E., Aminov R.I., Travis A.J., Lan A., Gaboriau-Routhiau V., Garden K., Logan E., Delday M., Coutts A.G.P., Grant G., Patterson A.M., Cerf-Bensussan N., Kelly D. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 16839 / NCIMB 14029 / A2-183.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003040 Genomic DNA. Translation: AEN97466.1.
RefSeq	YP_004839398.1. NC_015977.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEN97466; AEN97466; RHOM_11790.
GeneID	11149042.
KEGG	rho:RHOM_11790.
Organism-specific databases
CMR	Search...
Enzyme and pathway databases
BioCyc	RHOM585394:GHYQ-2337-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR011711. GntR_C. IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF07729. FCD. 1 hit. PF00392. GntR. 1 hit. [Graphical view]
PRINTS	PR00035. HTHGNTR.
SMART	SM00895. FCD. 1 hit. SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G2T421_ROSHA

Accession

Primary (citable) accession number: G2T421

Entry history

Integrated into UniProtKB/TrEMBL:	November 16, 2011
Last sequence update:	November 16, 2011
Last modified:	May 1, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)