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Protein
Submitted name:

Glycosyl hydrolase

Gene

RHOM_03440

Organism
Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciRHOM585394:GHYQ-712-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolaseImported
Gene namesi
Ordered Locus Names:RHOM_03440Imported
OrganismiRoseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183)Imported
Taxonomic identifieri585394 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeRoseburia
ProteomesiUP000008178 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG2T225.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.UniRule annotation

Phylogenomic databases

KOiK01223.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2T225-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGEKSFKKGF LWGGATAANQ IEGAYNEGGR GLANTDFLKY VAPNERRADE
60 70 80 90 100
ATFEQTYASL QEAKAHEDTY IFPKRWGNDF YHHYKEDIAL MAEMGFSVFR
110 120 130 140 150
MSISWSRIFP TGFEEKPNEE GLAFYDKVFD ECHKYGIEPL VTMLHYDFPL
160 170 180 190 200
AVCEKLNGFE SRETIALFEK YVRTIVERYH KKVKYWLTFN EINMSLQSLS
210 220 230 240 250
TCSGAMRDHS LKGLDEEQLT FEVVHNMLLA SAKAVILVHE IAPEALAGNM
260 270 280 290 300
VWKHVYYPKT VRPEDTLQQI FDMNLNYYFY DIQCKGVVPY YLDRYFEQKN
310 320 330 340 350
IKRNYSPEDI ETLKKGKADF LSFSYYMSNI SEYQGEPMKF TGLLPDQSRN
360 370 380 390 400
NPYLKMTDWG WSIDPVGLRI ALNQLYTRYG LPIFIAEFGI GMYESMDSNH
410 420 430 440 450
QIHDQGRIEF VEAHLKQIKE AIKDGVDVFG VTYWGWIDLV SSTTSEMTKR
460 470 480
YGFVYVDADD YGKGTYNRYK KDSFYWYKHV IETNGSEI
Length:488
Mass (Da):56,895
Last modified:November 16, 2011 - v1
Checksum:i984319C920117F62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003040 Genomic DNA. Translation: AEN95810.1.
RefSeqiYP_004837742.1. NC_015977.1.

Genome annotation databases

EnsemblBacteriaiAEN95810; AEN95810; RHOM_03440.
KEGGirho:RHOM_03440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003040 Genomic DNA. Translation: AEN95810.1.
RefSeqiYP_004837742.1. NC_015977.1.

3D structure databases

ProteinModelPortaliG2T225.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEN95810; AEN95810; RHOM_03440.
KEGGirho:RHOM_03440.

Phylogenomic databases

KOiK01223.

Enzyme and pathway databases

BioCyciRHOM585394:GHYQ-712-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Bi-directional cross-talk between a Clostridium symbiont, Roseburia hominis, the gut immune system and appetite regulation."
    Mulder I.E., Aminov R.I., Travis A.J., Lan A., Gaboriau-Routhiau V., Garden K., Logan E., Delday M., Coutts A.G.P., Grant G., Patterson A.M., Cerf-Bensussan N., Kelly D.
    Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16839 / NCIMB 14029 / A2-183Imported.

Entry informationi

Entry nameiG2T225_ROSHA
AccessioniPrimary (citable) accession number: G2T225
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 29, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.