G2SFD0 (G2SFD0_RHOMR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118
ORF Names:	Rhom172_2042 EMBL AEN73945.1

Organism

Rhodothermus marinus SG0.5JP17-172 [Complete proteome] EMBL AEN73945.1

Taxonomic identifier

762570 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Rhodothermus › Rhodothermus marinus

Protein attributes

Sequence length	398 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding RuleBase RU000323 HAMAP-Rule MF_00118 Nucleotide-binding
Molecular function	Elongation factor RuleBase RU000325 HAMAP-Rule MF_00118 EMBL AEN73945.1
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: UniProtKB-HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	84 – 88	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	139 – 142	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	G2SFD0 [UniParc]. Last modified November 16, 2011. Version 1. Checksum: EAF11E825A12C6FB	FASTA	398	44,065
	10 20 30 40 50 60 MAKEVFQRTK PHVNIGTIGH VDHGKTTLTA AITQVLAKRV PDPVNKPYTF DSIDNAPEER 70 80 90 100 110 120 ERGITIATAH VEYATEKRHY AHVDCPGHAD YVKNMITGAA QMDGAILVVA ATDGPMPQTR 130 140 150 160 170 180 EHILLARQVG VPYIVVFLNK VDLVDDEELL ELVEMEVREL LSQYEFPGDE VPVIRGSALG 190 200 210 220 230 240 ALNGDPQWED KIMELMNAVD EYIPTPVREK DKPFLMPIED VFSITGRGTV VTGRIERGVV 250 260 270 280 290 300 KVGDPVEIIG LREEKLTSVV TGVEMFRKQL EQGEAGDNVG LLLRGIGKED VERGMVVCAP 310 320 330 340 350 360 GSVTPHREFE CEVYVLSKEE GGRHTPFFNG YRPQFYFRTT DVTGDITLPE GVEMVMPGDN 370 380 390 ARFRVKLIYP VAMEEGLRFA IREGGRTVGA GVVTKILD

References

[1]

"Complete sequence of chromosome of Rhodothermus marinus SG0.5JP17-172." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Gladden J., Woyke T. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: SG0.5JP17-172 EMBL AEN73945.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003029 Genomic DNA. Translation: AEN73945.1.
RefSeq	YP_004825782.1. NC_015966.1.
3D structure databases
ModBase	Search...
MobiDB	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEN73945; AEN73945; Rhom172_2042.
GeneID	11113936.
KEGG	rmg:Rhom172_2042.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02358.
Enzyme and pathway databases
BioCyc	RMAR762570:GJAN-2084-MONOMER.
Family and domain databases
Gene3D	3.40.50.300. 1 hit.
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR027417. P-loop_NTPase. IPR005225. Small_GTP-bd_dom. IPR009000. Transl_B-barrel. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50447. SSF50447. 1 hit. SSF50465. SSF50465. 1 hit. SSF52540. SSF52540. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G2SFD0_RHOMR

Accession

Primary (citable) accession number: G2SFD0

Entry history

Integrated into UniProtKB/TrEMBL:	November 16, 2011
Last sequence update:	November 16, 2011
Last modified:	April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)