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G2SFD0

- G2SFD0_RHOMR

UniProt

G2SFD0 - G2SFD0_RHOMR

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Protein

Elongation factor Tu

Gene

tuf

Organism
Rhodothermus marinus SG0.5JP17-172
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi84 – 885GTPUniRule annotation
Nucleotide bindingi139 – 1424GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciRMAR762570:GJAN-2084-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
ORF Names:Rhom172_2042Imported
OrganismiRhodothermus marinus SG0.5JP17-172Imported
Taxonomic identifieri762570 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeRhodothermus
ProteomesiUP000001280: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2SFD0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKEVFQRTK PHVNIGTIGH VDHGKTTLTA AITQVLAKRV PDPVNKPYTF
60 70 80 90 100
DSIDNAPEER ERGITIATAH VEYATEKRHY AHVDCPGHAD YVKNMITGAA
110 120 130 140 150
QMDGAILVVA ATDGPMPQTR EHILLARQVG VPYIVVFLNK VDLVDDEELL
160 170 180 190 200
ELVEMEVREL LSQYEFPGDE VPVIRGSALG ALNGDPQWED KIMELMNAVD
210 220 230 240 250
EYIPTPVREK DKPFLMPIED VFSITGRGTV VTGRIERGVV KVGDPVEIIG
260 270 280 290 300
LREEKLTSVV TGVEMFRKQL EQGEAGDNVG LLLRGIGKED VERGMVVCAP
310 320 330 340 350
GSVTPHREFE CEVYVLSKEE GGRHTPFFNG YRPQFYFRTT DVTGDITLPE
360 370 380 390
GVEMVMPGDN ARFRVKLIYP VAMEEGLRFA IREGGRTVGA GVVTKILD
Length:398
Mass (Da):44,065
Last modified:November 16, 2011 - v1
Checksum:iEAF11E825A12C6FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003029 Genomic DNA. Translation: AEN73945.1.
RefSeqiYP_004825782.1. NC_015966.1.

Genome annotation databases

EnsemblBacteriaiAEN73945; AEN73945; Rhom172_2042.
GeneIDi11113936.
KEGGirmg:Rhom172_2042.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003029 Genomic DNA. Translation: AEN73945.1 .
RefSeqi YP_004825782.1. NC_015966.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEN73945 ; AEN73945 ; Rhom172_2042 .
GeneIDi 11113936.
KEGGi rmg:Rhom172_2042.

Phylogenomic databases

KOi K02358.

Enzyme and pathway databases

BioCyci RMAR762570:GJAN-2084-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Rhodothermus marinus SG0.5JP17-172."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Gladden J., Woyke T.
    Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SG0.5JP17-172Imported.

Entry informationi

Entry nameiG2SFD0_RHOMR
AccessioniPrimary (citable) accession number: G2SFD0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: October 29, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3