G2SD07 (G2SD07_ENTAL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
DNA-binding protein fis HAMAP-Rule MF_00166

Gene names

Name:	fis HAMAP-Rule MF_00166
Ordered Locus Names:	Entas_3953 EMBL AEN66662.1

Organism

Enterobacter asburiae (strain LF7a) [Complete proteome] [HAMAP]

Taxonomic identifier

640513 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Enterobacter › Enterobacter cloacae complex › Enterobacter asburiae

Protein attributes

Sequence length	98 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters By similarity. HAMAP-Rule MF_00166
Subunit structure	Homodimer By similarity. HAMAP-Rule MF_00166 SAAS SAAS005412
Sequence similarities	Belongs to the transcriptional regulatory fis family. HAMAP-Rule MF_00166

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS005412 HAMAP-Rule MF_00166
Ligand	DNA-binding SAAS SAAS005412 HAMAP-Rule MF_00166
Molecular function	Activator SAAS SAAS005412 HAMAP-Rule MF_00166
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	DNA binding	74 – 93	20	H-T-H motif By similarity HAMAP-Rule MF_00166

Sequences

	Sequence		Length	Mass (Da)
	G2SD07 [UniParc]. Last modified November 16, 2011. Version 1. Checksum: 2E339BFCFCDB163C	FASTA	98	11,240
	10 20 30 40 50 60 MFEQRVNSDV LTVSTVNSQD QVTQKPLRDS VKQALKNYFA QLNGQDVNDL YELVLAEVEQ 70 80 90 PLLDMVMQYT RGNQTRAALM MGINRGTLRK KLKKYGMN

References

[1]

"Complete sequence of chromosome of Enterobacter asburiae LF7a." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., van der Lelie D., Woyke T. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LF7a.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003026 Genomic DNA. Translation: AEN66662.1.
RefSeq	YP_004830447.1. NC_015968.1.
3D structure databases
ProteinModelPortal	G2SD07.
SMR	G2SD07. Positions 1-98.
ModBase	Search...
Proteomic databases
PRIDE	G2SD07.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEN66662; AEN66662; Entas_3953.
GeneID	11110403.
KEGG	eas:Entas_3953.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K03557.
OMA	HNQTRAA.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
HAMAP	MF_00166. DNA_binding_Fis.
InterPro	IPR005412. Fis_DNA-bd. IPR009057. Homeodomain-like. IPR002197. HTH_Fis. [Graphical view]
Pfam	PF02954. HTH_8. 1 hit. [Graphical view]
PIRSF	PIRSF002097. DNA-binding_Fis. 1 hit.
PRINTS	PR01591. DNABINDNGFIS. PR01590. HTHFIS.
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G2SD07_ENTAL

Accession

Primary (citable) accession number: G2SD07

Entry history

Integrated into UniProtKB/TrEMBL:	November 16, 2011
Last sequence update:	November 16, 2011
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)