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G2SCN7 (G2SCN7_ENTAL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
tRNA pseudouridine synthase B HAMAP-Rule MF_01080
EC=5.4.99.25 HAMAP-Rule MF_01080
Alternative name(s):
tRNA pseudouridine(55) synthase HAMAP-Rule MF_01080
tRNA pseudouridylate synthase HAMAP-Rule MF_01080
tRNA-uridine isomerase HAMAP-Rule MF_01080
Gene names
Name:truB HAMAP-Rule MF_01080
Ordered Locus Names:Entas_3832 EMBL AEN66542.1
OrganismEnterobacter asburiae (strain LF7a) [Complete proteome] [HAMAP]
Taxonomic identifier640513 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Enterobacter › Enterobacter cloacae complex ›

Protein attributes

Sequence length316 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs By similarity. SAAS SAAS014780 HAMAP-Rule MF_01080

Catalytic activity

tRNA uridine55 = tRNA pseudouridine55. SAAS SAAS014780 HAMAP-Rule MF_01080

Sequence similarities

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. HAMAP-Rule MF_01080

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site481Nucleophile By similarity HAMAP-Rule MF_01080
Binding site431Substrate By similarity HAMAP-Rule MF_01080
Binding site761Substrate By similarity HAMAP-Rule MF_01080
Binding site1791Substrate By similarity HAMAP-Rule MF_01080
Binding site2001Substrate By similarity HAMAP-Rule MF_01080

Sequences

Sequence LengthMass (Da)Tools
G2SCN7 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: C6EA643ADE03B9D8

FASTA31635,023
        10         20         30         40         50         60 
MSRPRRRGRD VHGVLLLDKP QGASSNDVLQ KVKRIFNANR AGHTGALDPL ATGMLPVCLG 

        70         80         90        100        110        120 
EATKFSQYLL DSDKRYRVIA KLGQRTDTSD ADGQVVEERP VTFSAEQLDA ALESFRGDTM 

       130        140        150        160        170        180 
QVPSMYSALK YQGKKLYEYA RQGIDVPREA RPITVYELLF IRHEGDELEL EVHCSKGTYI 

       190        200        210        220        230        240 
RTIIDDLGEK LGCGAHVIYL RRLAVSKYPV ERMVTLEHLH ALVEQAQAQG ISPAELLDPL 

       250        260        270        280        290        300 
LMPMDSPAAD FPIVNLPLTS SVYFKNGNPV RTTDAPLEGL VRVTEGDDGK FIGMGEMDGE 

       310 
GRVAPRRLVV EYPVEG

« Hide

References

[1]"Complete sequence of chromosome of Enterobacter asburiae LF7a."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., van der Lelie D., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LF7a.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003026 Genomic DNA. Translation: AEN66542.1.
RefSeqYP_004830327.1. NC_015968.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEN66542; AEN66542; Entas_3832.
GeneID11110280.
KEGGeas:Entas_3832.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03177.
OMALGCGAYV.

Family and domain databases

HAMAPMF_01080. TruB_bact.
InterProIPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR015947. PUA-like_domain.
IPR014780. tRNA_psdUridine_synth_TruB.
IPR015240. tRNA_sdUridine_synth_fam1_C.
[Graphical view]
PANTHERPTHR13767. PTHR13767. 1 hit.
PfamPF09157. TruB-C_2. 1 hit.
PF01509. TruB_N. 1 hit.
[Graphical view]
SUPFAMSSF55120. PsdUridine_synth_cat_dom. 1 hit.
SSF88697. PUA-like. 1 hit.
TIGRFAMsTIGR00431. TruB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG2SCN7_ENTAL
AccessionPrimary (citable) accession number: G2SCN7
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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