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G2PEB8

- G2PEB8_STRVO

UniProt

G2PEB8 - G2PEB8_STRVO

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Strvi_3581
Organism
Streptomyces violaceusniger Tu 4113
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-3375-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
ORF Names:Strvi_3581Imported
OrganismiStreptomyces violaceusniger Tu 4113Imported
Taxonomic identifieri653045 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000008703: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2PEB8-1 [UniParc]FASTAAdd to Basket

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MPPVEPMLAK AVATIPPGMR YEGKWDGFRA IVFRDGDEIE ISSRTTKPLT    50
RYFPELAEAL LANLPPRCVL DGEIIIVRGG RLDFDALLER IHPADSRVRL 100
LAKNTPSSFV AFDILALGDA SLMDTPLRER REALTEALRG ARDPVHLAPC 150
TDDLDMARQW FEQYEGAGLD GVVAKSPDLR YRPGERVMVK VKHERTADCV 200
VAGYRVHKSG QGVGSLLLGL YDDKGRLQHV GVSAAFTARR RQELLEELEP 250
LRMETVEGHP WADWAREEAH AKGRMPGAPS RWTGVKDLSW TPVRPERVCE 300
VAYDHMQGGR FRHTARFRRW RPDREPEQCT YDQLEEPVSY DLRQVLGSSA 350
ADA 353
Length:353
Mass (Da):39,803
Last modified:November 16, 2011 - v1
Checksum:iCF185137044247CD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002994 Genomic DNA. Translation: AEM83249.1.
RefSeqiYP_004813529.1. NC_015957.1.

Genome annotation databases

EnsemblBacteriaiAEM83249; AEM83249; Strvi_3581.
GeneIDi11086324.
KEGGisvl:Strvi_3581.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002994 Genomic DNA. Translation: AEM83249.1 .
RefSeqi YP_004813529.1. NC_015957.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEM83249 ; AEM83249 ; Strvi_3581 .
GeneIDi 11086324.
KEGGi svl:Strvi_3581.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SVIO653045:GHK6-3375-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A.
    , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
    Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Tu 4113Imported.

Entry informationi

Entry nameiG2PEB8_STRVO
AccessioniPrimary (citable) accession number: G2PEB8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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