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G2PEB8

- G2PEB8_STRVO

UniProt

G2PEB8 - G2PEB8_STRVO

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Strvi_3581

Organism
Streptomyces violaceusniger Tu 4113
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSVIO653045:GHK6-3375-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    ORF Names:Strvi_3581Imported
    OrganismiStreptomyces violaceusniger Tu 4113Imported
    Taxonomic identifieri653045 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000008703: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G2PEB8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPVEPMLAK AVATIPPGMR YEGKWDGFRA IVFRDGDEIE ISSRTTKPLT    50
    RYFPELAEAL LANLPPRCVL DGEIIIVRGG RLDFDALLER IHPADSRVRL 100
    LAKNTPSSFV AFDILALGDA SLMDTPLRER REALTEALRG ARDPVHLAPC 150
    TDDLDMARQW FEQYEGAGLD GVVAKSPDLR YRPGERVMVK VKHERTADCV 200
    VAGYRVHKSG QGVGSLLLGL YDDKGRLQHV GVSAAFTARR RQELLEELEP 250
    LRMETVEGHP WADWAREEAH AKGRMPGAPS RWTGVKDLSW TPVRPERVCE 300
    VAYDHMQGGR FRHTARFRRW RPDREPEQCT YDQLEEPVSY DLRQVLGSSA 350
    ADA 353
    Length:353
    Mass (Da):39,803
    Last modified:November 16, 2011 - v1
    Checksum:iCF185137044247CD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002994 Genomic DNA. Translation: AEM83249.1.
    RefSeqiYP_004813529.1. NC_015957.1.

    Genome annotation databases

    EnsemblBacteriaiAEM83249; AEM83249; Strvi_3581.
    GeneIDi11086324.
    KEGGisvl:Strvi_3581.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002994 Genomic DNA. Translation: AEM83249.1 .
    RefSeqi YP_004813529.1. NC_015957.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEM83249 ; AEM83249 ; Strvi_3581 .
    GeneIDi 11086324.
    KEGGi svl:Strvi_3581.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SVIO653045:GHK6-3375-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A.
      , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
      Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Tu 4113Imported.

    Entry informationi

    Entry nameiG2PEB8_STRVO
    AccessioniPrimary (citable) accession number: G2PEB8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3