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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Strvi_3581

Organism
Streptomyces violaceusniger Tu 4113
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-3375-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
ORF Names:Strvi_3581Imported
OrganismiStreptomyces violaceusniger Tu 4113Imported
Taxonomic identifieri653045 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
ProteomesiUP000008703 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi653045.Strvi_3581.

Family & Domainsi

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2PEB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPVEPMLAK AVATIPPGMR YEGKWDGFRA IVFRDGDEIE ISSRTTKPLT
60 70 80 90 100
RYFPELAEAL LANLPPRCVL DGEIIIVRGG RLDFDALLER IHPADSRVRL
110 120 130 140 150
LAKNTPSSFV AFDILALGDA SLMDTPLRER REALTEALRG ARDPVHLAPC
160 170 180 190 200
TDDLDMARQW FEQYEGAGLD GVVAKSPDLR YRPGERVMVK VKHERTADCV
210 220 230 240 250
VAGYRVHKSG QGVGSLLLGL YDDKGRLQHV GVSAAFTARR RQELLEELEP
260 270 280 290 300
LRMETVEGHP WADWAREEAH AKGRMPGAPS RWTGVKDLSW TPVRPERVCE
310 320 330 340 350
VAYDHMQGGR FRHTARFRRW RPDREPEQCT YDQLEEPVSY DLRQVLGSSA

ADA
Length:353
Mass (Da):39,803
Last modified:November 16, 2011 - v1
Checksum:iCF185137044247CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002994 Genomic DNA. Translation: AEM83249.1.
RefSeqiWP_014056747.1. NC_015957.1.
YP_004813529.1. NC_015957.1.

Genome annotation databases

EnsemblBacteriaiAEM83249; AEM83249; Strvi_3581.
KEGGisvl:Strvi_3581.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002994 Genomic DNA. Translation: AEM83249.1.
RefSeqiWP_014056747.1. NC_015957.1.
YP_004813529.1. NC_015957.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi653045.Strvi_3581.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEM83249; AEM83249; Strvi_3581.
KEGGisvl:Strvi_3581.

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-3375-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A.
    , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
    Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Tu 4113Imported.

Entry informationi

Entry nameiG2PEB8_STRVO
AccessioniPrimary (citable) accession number: G2PEB8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 24, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.