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G2PEB8 (G2PEB8_STRVO) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Strvi_3581 EMBL AEM83249.1
OrganismStreptomyces violaceusniger Tu 4113 [Complete proteome] EMBL AEM83249.1
Taxonomic identifier653045 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G2PEB8 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: CF185137044247CD

FASTA35339,803
        10         20         30         40         50         60 
MPPVEPMLAK AVATIPPGMR YEGKWDGFRA IVFRDGDEIE ISSRTTKPLT RYFPELAEAL 

        70         80         90        100        110        120 
LANLPPRCVL DGEIIIVRGG RLDFDALLER IHPADSRVRL LAKNTPSSFV AFDILALGDA 

       130        140        150        160        170        180 
SLMDTPLRER REALTEALRG ARDPVHLAPC TDDLDMARQW FEQYEGAGLD GVVAKSPDLR 

       190        200        210        220        230        240 
YRPGERVMVK VKHERTADCV VAGYRVHKSG QGVGSLLLGL YDDKGRLQHV GVSAAFTARR 

       250        260        270        280        290        300 
RQELLEELEP LRMETVEGHP WADWAREEAH AKGRMPGAPS RWTGVKDLSW TPVRPERVCE 

       310        320        330        340        350 
VAYDHMQGGR FRHTARFRRW RPDREPEQCT YDQLEEPVSY DLRQVLGSSA ADA 

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References

[1]"Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A. expand/collapse author list , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tu 4113 EMBL AEM83249.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002994 Genomic DNA. Translation: AEM83249.1.
RefSeqYP_004813529.1. NC_015957.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM83249; AEM83249; Strvi_3581.
GeneID11086324.
KEGGsvl:Strvi_3581.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycSVIO653045:GHK6-3375-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2PEB8_STRVO
AccessionPrimary (citable) accession number: G2PEB8
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)