Skip Header

Contribute Send feedback
Read comments (?) or add your own

G2PEB7 (G2PEB7_STRVO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
DNA polymerase LigD, polymerase domain protein EMBL AEM83248.1
Gene names
ORF Names:Strvi_3580 EMBL AEM83248.1
OrganismStreptomyces violaceusniger Tu 4113 EMBL AEM83248.1
Taxonomic identifier653045 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces ›

Protein attributes

Sequence length334 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G2PEB7 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: F985ADCA632987FF

FASTA33437,864
        10         20         30         40         50         60 
MAESVELTVG GRTVRVTNPG KVYFPERGFT KLDLARYYLA VGEGALRALR DRPTTLERYP 

        70         80         90        100        110        120 
DGVDGESFFQ KRAPKNLPEW IPTGRISFPS GRHADEICPT ETAAVVWAAN LGSLTFHPWP 

       130        140        150        160        170        180 
VRREDTEHPD ELRIDLDPQP GTDYEDAVRA AEELREVLDG LGLRGWPKTS GGRGLHVFVP 

       190        200        210        220        230        240 
IAPEWTFTQV RRSAIAIARE LERRAPERVT TKWWKEERGR KIFVDYNQTA RDRTIASAYS 

       250        260        270        280        290        300 
VRPRPHAPVS APLRWAEVPD ARPRDFDLAT MPVRYRELGD VHADMDEHAF RLESALELAT 

       310        320        330 
RDEQEHGLGD LPYPPEHPKA AGEPKRVQPS RAKK

« Hide

References

[1]"Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A. expand/collapse author list , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tu 4113 EMBL AEM83248.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002994 Genomic DNA. Translation: AEM83248.1.
RefSeqYP_004813528.1. NC_015957.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM83248; AEM83248; Strvi_3580.
GeneID11086323.
KEGGsvl:Strvi_3580.

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG2PEB7_STRVO
AccessionPrimary (citable) accession number: G2PEB7
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info