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Protein
Submitted name:

Laminin G sub domain 2

Gene

Strvi_2597

Organism
Streptomyces violaceusniger Tu 4113
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-2383-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Laminin G sub domain 2Imported
Gene namesi
ORF Names:Strvi_2597Imported
OrganismiStreptomyces violaceusniger Tu 4113Imported
Taxonomic identifieri653045 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000008703 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 629612Sequence analysisPRO_5003435183Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi653045.Strvi_2597.

Structurei

3D structure databases

ProteinModelPortaliG2PDL4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini458 – 593136LAM_G_DOMAINInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108478. Bacteria.
COG4409. LUCA.
KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
[Graphical view]
SMARTiSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

G2PDL4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLTAAALAL IPLPVRAADT DSSASAARAD SGFEQQVLFK SAQEQGYSCF
60 70 80 90 100
RIPAIVKAKD GSLLAFAEGR VDNCGDAGDI DLVLKRSTDG GRTWGPLQVI
110 120 130 140 150
NEGGGDTHGN PAPVVDLRTG RIVLASTYNT GRDDSQSCDV PCDRSPHLQY
160 170 180 190 200
SDDNGATWSA PRDLSSSLMP PQWNSWYATG PVHGIQLQRG RHKGRLLFTL
210 220 230 240 250
NTESYSGGRI TDNHAALAYS DDGGNRWRIG AMDTYPLTED GTFRQKPSEM
260 270 280 290 300
TLVERADGSV YVSGREQDGT DLGHRDYAIS RDGGQSFTGP FRTIPDLPTP
310 320 330 340 350
QVQGSILRLR DPARDGHSRL LFSAPADPDR RRTMMVRSSW DEARTWDGVE
360 370 380 390 400
RGKVVTTDWS GYSDMVAVSR DTVGLLYEGG AVDARDEIRF ARFTEDWLGP
410 420 430 440 450
RQAPAPTTDD RASGARSATV LGGAAARGDG RFGGGMSFDG TDDAVRVPYR
460 470 480 490 500
TALPLGTRDF TVSLWFRYSA ASGQHPFLWM GGIGTKQPQV WLRGEPGSNR
510 520 530 540 550
IRALMTTVNG FSTFTSASVS SDAAYNDGQW HHLALTRSGG RLSLTVDGGT
560 570 580 590 600
AVTAPDAPGT VSRTAPFGLH LGQAVDGRSH MTGDLDEFRL YGRALTDTEL
610 620
RRVREFNAPL DDSGALVHLP LDRVRSSHH
Length:629
Mass (Da):68,023
Last modified:November 16, 2011 - v1
Checksum:i77AEE3D7577339A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002994 Genomic DNA. Translation: AEM82314.1.
RefSeqiWP_014055819.1. NC_015957.1.

Genome annotation databases

EnsemblBacteriaiAEM82314; AEM82314; Strvi_2597.
KEGGisvl:Strvi_2597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002994 Genomic DNA. Translation: AEM82314.1.
RefSeqiWP_014055819.1. NC_015957.1.

3D structure databases

ProteinModelPortaliG2PDL4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi653045.Strvi_2597.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEM82314; AEM82314; Strvi_2597.
KEGGisvl:Strvi_2597.

Phylogenomic databases

eggNOGiENOG4108478. Bacteria.
COG4409. LUCA.
KOiK01186.

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-2383-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
[Graphical view]
SMARTiSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A.
    , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
    Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tu 4133Imported.

Entry informationi

Entry nameiG2PDL4_STRVO
AccessioniPrimary (citable) accession number: G2PDL4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 13, 2016
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.