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G2PDL4 (G2PDL4_STRVO) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Strvi_2597 EMBL AEM82314.1
OrganismStreptomyces violaceusniger Tu 4113 [Complete proteome] EMBL AEM82314.1
Taxonomic identifier653045 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length629 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AEM82314.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential EMBL AEM82314.1
Chain19 – 629611 Potential EMBL AEM82314.1
PRO_5000787725

Sequences

Sequence LengthMass (Da)Tools
G2PDL4 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 77AEE3D7577339A7

FASTA62968,023
        10         20         30         40         50         60 
MLLTAAALAL IPLPVRAADT DSSASAARAD SGFEQQVLFK SAQEQGYSCF RIPAIVKAKD 

        70         80         90        100        110        120 
GSLLAFAEGR VDNCGDAGDI DLVLKRSTDG GRTWGPLQVI NEGGGDTHGN PAPVVDLRTG 

       130        140        150        160        170        180 
RIVLASTYNT GRDDSQSCDV PCDRSPHLQY SDDNGATWSA PRDLSSSLMP PQWNSWYATG 

       190        200        210        220        230        240 
PVHGIQLQRG RHKGRLLFTL NTESYSGGRI TDNHAALAYS DDGGNRWRIG AMDTYPLTED 

       250        260        270        280        290        300 
GTFRQKPSEM TLVERADGSV YVSGREQDGT DLGHRDYAIS RDGGQSFTGP FRTIPDLPTP 

       310        320        330        340        350        360 
QVQGSILRLR DPARDGHSRL LFSAPADPDR RRTMMVRSSW DEARTWDGVE RGKVVTTDWS 

       370        380        390        400        410        420 
GYSDMVAVSR DTVGLLYEGG AVDARDEIRF ARFTEDWLGP RQAPAPTTDD RASGARSATV 

       430        440        450        460        470        480 
LGGAAARGDG RFGGGMSFDG TDDAVRVPYR TALPLGTRDF TVSLWFRYSA ASGQHPFLWM 

       490        500        510        520        530        540 
GGIGTKQPQV WLRGEPGSNR IRALMTTVNG FSTFTSASVS SDAAYNDGQW HHLALTRSGG 

       550        560        570        580        590        600 
RLSLTVDGGT AVTAPDAPGT VSRTAPFGLH LGQAVDGRSH MTGDLDEFRL YGRALTDTEL 

       610        620 
RRVREFNAPL DDSGALVHLP LDRVRSSHH 

« Hide

References

[1]"Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A. expand/collapse author list , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tu 4113 EMBL AEM82314.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002994 Genomic DNA. Translation: AEM82314.1.
RefSeqYP_004812594.1. NC_015957.1.

3D structure databases

ProteinModelPortalG2PDL4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM82314; AEM82314; Strvi_2597.
GeneID11084392.
KEGGsvl:Strvi_2597.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Enzyme and pathway databases

BioCycSVIO653045:GHK6-2383-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SMARTSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG2PDL4_STRVO
AccessionPrimary (citable) accession number: G2PDL4
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 14, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)