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G2PD33 (G2PD33_STRVO) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site381Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2701Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1361Substrate By similarity HAMAP-Rule MF_01201
Binding site3181Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue381N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G2PD33 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: DA4489D18F7763A9

FASTA38439,910
        10         20         30         40         50         60 
MDETPMRARA VVDLAALRAN VRALRDAAPT AELMAVVKAD AYGHGMIPCA RAARKAGASW 

        70         80         90        100        110        120 
LGAATPEEAL GLRAAGDTGR LMCWLWTPGG PWRQAIEADI DVSASGLWAL REAVAAARAC 

       130        140        150        160        170        180 
GRTARLHLKA DTGLGRSGCQ PADWPALVDE ARAAEAEGAI RVTGLWSHFA CADEPGHPSI 

       190        200        210        220        230        240 
GAQLSVFREM VAHAEQAGLR PEVRHLANSP ATLTVPESHF DLVRTGIATY GISPSPELGT 

       250        260        270        280        290        300 
AADFGLRPVM TLSAALASVK RVPGGHGVSY GHRYVTPGET TLALVPVGYG DGIPRHASGT 

       310        320        330        340        350        360 
GPVLVAGKWR TIAGTVAMDQ FVVDLGGDTA APGDEAVLFG PGDRGEPTAE DWARAVGSIA 

       370        380 
YEIVTRISAR IPRVYVGEDG GTGN

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References

[1]"Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A. expand/collapse author list , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tu 4113 EMBL AEM80692.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002994 Genomic DNA. Translation: AEM80692.1.
RefSeqYP_004810972.1. NC_015957.1.

3D structure databases

ProteinModelPortalG2PD33.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM80692; AEM80692; Strvi_0921.
GeneID11089888.
KEGGsvl:Strvi_0921.

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycSVIO653045:GHK6-692-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2PD33_STRVO
AccessionPrimary (citable) accession number: G2PD33
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 29, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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