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G2P8U8 (G2P8U8_STRVO) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:Strvi_7302 EMBL AEM86663.1
OrganismStreptomyces violaceusniger Tu 4113 [Complete proteome] EMBL AEM86663.1
Taxonomic identifier653045 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length463 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   DomainSignal EMBL AEM86663.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL AEM86663.1
Chain33 – 463431 Potential EMBL AEM86663.1
PRO_5000787585

Sequences

Sequence LengthMass (Da)Tools
G2P8U8 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: DBFED472182F984F

FASTA46349,829
        10         20         30         40         50         60 
MAGNRIPLAT ALALAAGSVA LFALPPQTAQ ATPPGTKDVT AELFEWRYDS VAKECTSTLG 

        70         80         90        100        110        120 
PAGYGYVEVS PATEHIQGGQ WWTSYQPVSY KIAGRLGDRT AFKNMIDTCH SAGVKVVADA 

       130        140        150        160        170        180 
VINHMSAGSG TGTGGSSYTK YDYPGIYQAQ DMDDCTSQIS NYQDRWNVQH CELVGLADLD 

       190        200        210        220        230        240 
TGESYVRTRI AQYLNDLLSL GVDGFRVDGA KHIPTEDLAA IKSQLSDPGV YWKQEVIYGE 

       250        260        270        280        290        300 
GEAVSPTEYL RNGDVQEFRY GRDLKRVFQG EKLANLKNFG EGWGYMASGQ SGVFVDNWDT 

       310        320        330        340        350        360 
ERNGSTLTYK NGADYTLANV FMLAWPYGSP DVHSGYEFGD NDAGPPNGGT VGACYQDGWK 

       370        380        390        400        410        420 
CQHKWPEIMS MVALRNTARG ASVTNWWDNG NNAIAFGRGD KAYVAINHES GSLTQTFQTS 

       430        440        450        460 
LPAGGYCDVQ SGKAVTVDSA GKFTATLGAN TAVALHVGAR NCG 

« Hide

References

[1]"Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A. expand/collapse author list , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tu 4113 EMBL AEM86663.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002994 Genomic DNA. Translation: AEM86663.1.
RefSeqYP_004816943.1. NC_015957.1.

3D structure databases

ProteinModelPortalG2P8U8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM86663; AEM86663; Strvi_7302.
GeneID11085851.
KEGGsvl:Strvi_7302.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycSVIO653045:GHK6-7104-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG2P8U8_STRVO
AccessionPrimary (citable) accession number: G2P8U8
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 22, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)