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G2P8U8

- G2P8U8_STRVO

UniProt

G2P8U8 - G2P8U8_STRVO

Protein

Alpha-amylase

Gene

Strvi_7302

Organism
Streptomyces violaceusniger Tu 4113
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSVIO653045:GHK6-7104-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:Strvi_7302Imported
    OrganismiStreptomyces violaceusniger Tu 4113Imported
    Taxonomic identifieri653045 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000008703: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3232 PotentialImportedAdd
    BLAST
    Chaini33 – 463431 PotentialImportedPRO_5000787585Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliG2P8U8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    G2P8U8-1 [UniParc]FASTAAdd to Basket

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    MAGNRIPLAT ALALAAGSVA LFALPPQTAQ ATPPGTKDVT AELFEWRYDS    50
    VAKECTSTLG PAGYGYVEVS PATEHIQGGQ WWTSYQPVSY KIAGRLGDRT 100
    AFKNMIDTCH SAGVKVVADA VINHMSAGSG TGTGGSSYTK YDYPGIYQAQ 150
    DMDDCTSQIS NYQDRWNVQH CELVGLADLD TGESYVRTRI AQYLNDLLSL 200
    GVDGFRVDGA KHIPTEDLAA IKSQLSDPGV YWKQEVIYGE GEAVSPTEYL 250
    RNGDVQEFRY GRDLKRVFQG EKLANLKNFG EGWGYMASGQ SGVFVDNWDT 300
    ERNGSTLTYK NGADYTLANV FMLAWPYGSP DVHSGYEFGD NDAGPPNGGT 350
    VGACYQDGWK CQHKWPEIMS MVALRNTARG ASVTNWWDNG NNAIAFGRGD 400
    KAYVAINHES GSLTQTFQTS LPAGGYCDVQ SGKAVTVDSA GKFTATLGAN 450
    TAVALHVGAR NCG 463
    Length:463
    Mass (Da):49,829
    Last modified:November 16, 2011 - v1
    Checksum:iDBFED472182F984F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002994 Genomic DNA. Translation: AEM86663.1.
    RefSeqiWP_014060139.1. NC_015957.1.
    YP_004816943.1. NC_015957.1.

    Genome annotation databases

    EnsemblBacteriaiAEM86663; AEM86663; Strvi_7302.
    GeneIDi11085851.
    KEGGisvl:Strvi_7302.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002994 Genomic DNA. Translation: AEM86663.1 .
    RefSeqi WP_014060139.1. NC_015957.1.
    YP_004816943.1. NC_015957.1.

    3D structure databases

    ProteinModelPortali G2P8U8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEM86663 ; AEM86663 ; Strvi_7302 .
    GeneIDi 11085851.
    KEGGi svl:Strvi_7302.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci SVIO653045:GHK6-7104-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A.
      , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
      Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Tu 4113Imported.

    Entry informationi

    Entry nameiG2P8U8_STRVO
    AccessioniPrimary (citable) accession number: G2P8U8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3