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Protein
Submitted name:

Glycoside hydrolase family 2 sugar-binding protein

Gene

Strvi_5102

Organism
Streptomyces violaceusniger Tu 4113
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-4895-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 2 sugar-binding proteinImported
Gene namesi
ORF Names:Strvi_5102Imported
OrganismiStreptomyces violaceusniger Tu 4113Imported
Taxonomic identifieri653045 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000008703: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG2NUP3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01190.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.320. 1 hit.
2.60.40.920. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003344. Big_1.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR008964. Invasin/intimin_cell_adhesion.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2NUP3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVTRRSILI AGTAAPMAGA LVTANPAQGA LASRAMGGRT IPLTDGWRFA
60 70 80 90 100
LVNPGGITDP TGAYETAHDP AYDDSAWREV AVPHDWSIEL SPTTDHGTSG
110 120 130 140 150
GTGFLPGGLG WYRTTFTLPR TLEGKRICVE FDGVYMDSSV YCNGRPLGEH
160 170 180 190 200
PYGYTGFALD LTEVAHTDGA TPNVLAVKVR NRLPSSRWYS GSGIYRHARL
210 220 230 240 250
VVTDPVHVAR WGTYLTTPGL ATALRAGYAT VRARTLVVNA SDGPKPVTVV
260 270 280 290 300
STVKDPDGHT VVQAHSTVTI GAGDTRTATQ ELRIDRPRLW SFDTPERYVL
310 320 330 340 350
ETELRVGQDT TDRYRTPFGL RHVTLDPDRG FSLNGEYAKL QGVDLHHDLG
360 370 380 390 400
ALGAAVNTDA VLRQVAIMKS MGVNALRTSH NPPSPELIEV CERLGIVMLV
410 420 430 440 450
EAFDCWRTGK NTYDYGRFFD EHCEADITEM VRAARNSPAV VMWSIGNEIP
460 470 480 490 500
DSTSAPGLGM AQRLIDAVRA ADDTRPVVIG SDKYRGLPAE GSPADLMLAK
510 520 530 540 550
LDGLGLNYNT AASVDALHAR YPRLFLFESE SSSETSTRGA YQEPEHLNTG
560 570 580 590 600
ENHTPGRRET SSYDNNLASW TMSGEYGLKK DRDRRFFAGQ FLWSGIDYIG
610 620 630 640 650
EPTPYDVFPV KASFFGAVDT AGFPKDMYYL FKSQWTGEPM VHLVPMDWTG
660 670 680 690 700
HRPGETVEVW AYSNVASVEL FLDGRSLGVR EFDAKKTTDG RAYLETTEPT
710 720 730 740 750
GDDKTVTSGP YPGSYTSPGG SAGKLHLTWK VPFARGELKA VARRGGRVVA
760 770 780 790 800
TDVLRTAGRP HTVRLTPDRE SVDADGRSLC FVTAEVVDAH GVVVPDAGHP
810 820 830 840 850
IAFKVTGGSL AGVDNGRQES AERYQASTRT AFHGKALAIV RSGTEAGPLT
860 870 880 890 900
ITARSAGLRT ATTTVRATGG TSQPVTRPVP FAPDPGPGAP DQPRADASYS
910 920 930 940 950
GAPTTLPAAM LDGDPATGWS NAFHKPATAL LPAFDGARKA DWVSVTWSGR
960 970 980 990 1000
RRLRRVEVSF TVDATHTLPA SIEVSAWNGH AYVPVRGASV DWATASGTPT
1010 1020 1030
VITFDPVRTS RLRLDLTSRH PGAADGAQRI VAFEAR
Length:1,036
Mass (Da):111,642
Last modified:November 16, 2011 - v1
Checksum:i7F3B2D586FC5064D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002994 Genomic DNA. Translation: AEM84642.1.
RefSeqiWP_014058128.1. NC_015957.1.
YP_004814922.1. NC_015957.1.

Genome annotation databases

EnsemblBacteriaiAEM84642; AEM84642; Strvi_5102.
GeneIDi11088898.
KEGGisvl:Strvi_5102.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002994 Genomic DNA. Translation: AEM84642.1.
RefSeqiWP_014058128.1. NC_015957.1.
YP_004814922.1. NC_015957.1.

3D structure databases

ProteinModelPortaliG2NUP3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEM84642; AEM84642; Strvi_5102.
GeneIDi11088898.
KEGGisvl:Strvi_5102.

Phylogenomic databases

KOiK01190.

Enzyme and pathway databases

BioCyciSVIO653045:GHK6-4895-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.320. 1 hit.
2.60.40.920. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003344. Big_1.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR008964. Invasin/intimin_cell_adhesion.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Streptomyces violaceusniger Tu 4113."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ivanova N., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hagen A.
    , Katz L., Fiedler H.-P., Keasling J., Fortman J., Woyke T.
    Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Tu 4113Imported.

Entry informationi

Entry nameiG2NUP3_STRVO
AccessioniPrimary (citable) accession number: G2NUP3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.