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G2NRI0 (G2NRI0_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. SAAS SAAS001998 RuleBase RU000609 HAMAP-Rule MF_00455

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. RuleBase RU000610 HAMAP-Rule MF_00455

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609 HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site561 By similarity HAMAP-Rule MF_00455
Active site591 By similarity HAMAP-Rule MF_00455
Metal binding1831Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2191Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2191Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2221Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2471Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2571Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2591Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2891Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
G2NRI0 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 4AD0522DB812E433

FASTA38943,444
        10         20         30         40         50         60 
MPERFTPTPE DKFTFGLWTV GWRGNDPFGE PTRPVLDPVE SVERLAELGA HGVTFHDDDL 

        70         80         90        100        110        120 
IPFGSDDRER ARLVGRFREA LERTGLKVPM ATTNLFTHPV FKDGGFTSND RDVRRFALRK 

       130        140        150        160        170        180 
VIRNIDLAVE LGAQTYVAWG GREGAESGAA KDVRSALDRM KEAFDLLGDY VTEQGYDLRF 

       190        200        210        220        230        240 
AIEPKPNEPR GDILLPTIGH ALAFIERLER PELVGVNPET GHEQMAGLNF PHGIAQALWA 

       250        260        270        280        290        300 
GKLFHIDLNG QSGIKYDQDF RFGAGDLRQA FWLVDLLETA GWDGSRHFDF KPVRTDGIDG 

       310        320        330        340        350        360 
VWESAKNCMR NYLILKERAA AFRADPAVQE ALTASRLDEL ARPTADDGLK ALLADRTAYE 

       370        380 
DFDATAAAER SMAFEALDQL AMDHLLNVR 

« Hide

References

[1]"Complete sequence of Streptomyces sp. SirexAA-E."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Adams A. expand/collapse author list , Raffa K., Adams S., Book A., Currie C., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SirexAA-E EMBL AEN13613.1.
[2]"Biochemical Properties and Atomic Resolution Structure of a Proteolytically Processed beta-Mannanase from Cellulolytic Streptomyces sp. SirexAA-E."
Takasuka T.E., Acheson J.F., Bianchetti C.M., Prom B.M., Bergeman L.F., Book A.J., Currie C.R., Fox B.G.
PLoS ONE 9:E94166-E94166(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SirexAA-E EMBL AEN13613.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002993 Genomic DNA. Translation: AEN13046.1.
CP002993 Genomic DNA. Translation: AEN13613.1.
RefSeqYP_004805586.1. NC_015953.1.
YP_004806153.1. NC_015953.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEN13046; AEN13046; SACTE_5230.
AEN13613; AEN13613; SACTE_5828.
GeneID11098352.
11099842.
KEGGssx:SACTE_5230.
ssx:SACTE_5828.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Enzyme and pathway databases

BioCycSSP862751:GHMW-5312-MONOMER.
SSP862751:GHMW-5911-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02631. xylA_Arthro. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2NRI0_9ACTO
AccessionPrimary (citable) accession number: G2NRI0
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)