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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

SACTE_4536

Organism
Streptomyces sp. (strain SirexAA-E / ActE)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSSP862751:GHMW-4611-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
ORF Names:SACTE_4536Imported
OrganismiStreptomyces sp. (strain SirexAA-E / ActE)Imported
Taxonomic identifieri862751 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000001397: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

G2NM89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPITEVEGR RLALSNLDKV LYPATGTTKG EVLHYYAATA ADAMLPHLRD
60 70 80 90 100
RPLSFLRYPD GPDGLRFFTK NPPPGTPDWV RTAPVPRTDD PDARQVLVQD
110 120 130 140 150
LPSLMWAANL VVEFHTHQWR RGTPAVADRM VFDLDPGAPA SVVECCAVAL
160 170 180 190 200
WLRERLAADG LTAYGKTSGS KGLHLIVPLE PAPAEDVTAY AKSLAVEAQK
210 220 230 240 250
ALPDLVVHRM TRALRPGKVF VDFSQNAAAK TTAAPYTLRA KDSPTVSAPV
260 270 280 290
TWEEVEACAD PADLVFLAGD MAARLERYGD LLGPLTGPGP ARPLPGV
Length:297
Mass (Da):32,047
Last modified:November 16, 2011 - v1
Checksum:i476B8AD1BBFAA644
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002993 Genomic DNA. Translation: AEN12366.1.
RefSeqiYP_004804906.1. NC_015953.1.

Genome annotation databases

EnsemblBacteriaiAEN12366; AEN12366; SACTE_4536.
GeneIDi11103140.
KEGGissx:SACTE_4536.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002993 Genomic DNA. Translation: AEN12366.1.
RefSeqiYP_004804906.1. NC_015953.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEN12366; AEN12366; SACTE_4536.
GeneIDi11103140.
KEGGissx:SACTE_4536.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciSSP862751:GHMW-4611-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Biochemical Properties and Atomic Resolution Structure of a Proteolytically Processed beta-Mannanase from Cellulolytic Streptomyces sp. SirexAA-E."
    Takasuka T.E., Acheson J.F., Bianchetti C.M., Prom B.M., Bergeman L.F., Book A.J., Currie C.R., Fox B.G.
    PLoS ONE 9:E94166-E94166(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SirexAA-EImported.

Entry informationi

Entry nameiG2NM89_STREK
AccessioniPrimary (citable) accession number: G2NM89
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.