G2NJ10 (G2NJ10_9ACTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA polymerase, sigma-24 subunit, ECF subfamily EMBL AEN12283.1

Gene names

ORF Names:

SACTE_4453 EMBL AEN12283.1

Organism

Streptomyces sp. SirexAA-E EMBL AEN12283.1

Taxonomic identifier

862751 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding SAAS SAAS013325
Molecular function	Sigma factor SAAS SAAS013325
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, initiation Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro sigma factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G2NJ10 [UniParc]. Last modified November 16, 2011. Version 1. Checksum: 1EC573F0A41C07EB	FASTA	280	30,825
	10 20 30 40 50 60 MGSTICPRRS STADLEWTVL HAARTTSQGT AAGADRQPAR KQGRLFSDAS GSGFGSATSL 70 80 90 100 110 120 EEVGPVTGTD TGTDDGRAKE TTAERNARFE RDALGYLDQM YSAALRMTRN PADAEDLVQE 130 140 150 160 170 180 TYAKAYGSFH QFREGTNLKA WMYRILTNTF INSYRKKQRE PQRSAAEEIE DWQLARAESH 190 200 210 220 230 240 MSTGLRSAES QALDHLPDSD VKSALQAIPE EFRIAVYLAD VEGFAYKEIA DIMGTPIGTV 250 260 270 280 MSRLHRGRRQ LRGMLEDYAR ERGLVPAGAG ESDDRKGSAS

References

[1]

"Complete sequence of Streptomyces sp. SirexAA-E." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Adams A. , Raffa K., Adams S., Book A., Currie C., Woyke T. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: SirexAA-E EMBL AEN12283.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002993 Genomic DNA. Translation: AEN12283.1.
RefSeq	YP_004804823.1. NC_015953.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEN12283; AEN12283; SACTE_4453.
GeneID	11102976.
KEGG	ssx:SACTE_4453.
Phylogenomic databases
KO	K03088.
Enzyme and pathway databases
BioCyc	SSP862751:GHMW-4528-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR014284. RNA_pol_sigma-70_dom. IPR014293. RNA_pol_sigma70_actinobac. IPR007627. RNA_pol_sigma70_r2. IPR013249. RNA_pol_sigma70_r4_t2. IPR013325. RNA_pol_sigma_r2. IPR013324. RNA_pol_sigma_r3_r4. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF04542. Sigma70_r2. 1 hit. PF08281. Sigma70_r4_2. 1 hit. [Graphical view]
SUPFAM	SSF88946. Sigma_r2. 1 hit. SSF88659. Sigma_r3_r4. 1 hit.
TIGRFAMs	TIGR02947. SigH_actino. 1 hit. TIGR02937. sigma70-ECF. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G2NJ10_9ACTO

Accession

Primary (citable) accession number: G2NJ10

Entry history

Integrated into UniProtKB/TrEMBL:	November 16, 2011
Last sequence update:	November 16, 2011
Last modified:	May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)