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G2NHN4

- G2NHN4_9ACTO

UniProt

G2NHN4 - G2NHN4_9ACTO

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

SACTE_2357

Organism
Streptomyces sp. SirexAA-E
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSSP862751:GHMW-2387-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported
    Gene namesi
    ORF Names:SACTE_2357Imported
    OrganismiStreptomyces sp. SirexAA-EImported
    Taxonomic identifieri862751 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000001397: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2222 PotentialImportedAdd
    BLAST
    Chaini23 – 320298 PotentialImportedPRO_5000786675Add
    BLAST

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    G2NHN4-1 [UniParc]FASTAAdd to Basket

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    MSTLPRFAPM LATPGPLPSA AVDDQWAYEV KQDGQRALVY LPGDGSMELR    50
    ARSGTVITAA YPDLAGLGAA LGGVPAVLDG EIVALDSQGR SDFERLQSRM 100
    GLSGSPAKAA RAAERVPAQL VLFDALFLRD ASLVSLGYRE RRAALEGLGL 150
    DGPRWSTPSV VVGHGRQALD MTREAGLEGV LAKRLNSVYE PGVRSRSWIK 200
    IRHALTADVV VGGWVPGRGR LGGLPGALLV GERHEGGLRY AGSVGTGWSD 250
    AERHRLAELL RVAAIDTCPF DVAPRVAGAR WVLPRLVGEV RYSTRTRAGR 300
    LRQPSWHRLR PDLAPDDLET 320
    Length:320
    Mass (Da):34,314
    Last modified:November 16, 2011 - v1
    Checksum:iD2D0F691F26FDD5F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002993 Genomic DNA. Translation: AEN10245.1.
    RefSeqiYP_004802785.1. NC_015953.1.

    Genome annotation databases

    EnsemblBacteriaiAEN10245; AEN10245; SACTE_2357.
    GeneIDi11100206.
    KEGGissx:SACTE_2357.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002993 Genomic DNA. Translation: AEN10245.1 .
    RefSeqi YP_004802785.1. NC_015953.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEN10245 ; AEN10245 ; SACTE_2357 .
    GeneIDi 11100206.
    KEGGi ssx:SACTE_2357.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SSP862751:GHMW-2387-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Biochemical Properties and Atomic Resolution Structure of a Proteolytically Processed beta-Mannanase from Cellulolytic Streptomyces sp. SirexAA-E."
      Takasuka T.E., Acheson J.F., Bianchetti C.M., Prom B.M., Bergeman L.F., Book A.J., Currie C.R., Fox B.G.
      PLoS ONE 9:E94166-E94166(2014) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SirexAA-EImported.

    Entry informationi

    Entry nameiG2NHN4_9ACTO
    AccessioniPrimary (citable) accession number: G2NHN4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3