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Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

SACTE_2357

Organism
Streptomyces sp. (strain SirexAA-E / ActE)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSSP862751:GHMW-2387-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain proteinImported
Gene namesi
ORF Names:SACTE_2357Imported
OrganismiStreptomyces sp. (strain SirexAA-E / ActE)Imported
Taxonomic identifieri862751 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
ProteomesiUP000001397 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222 PotentialImportedAdd
BLAST
Chaini23 – 320298 PotentialImportedPRO_5000786675Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi862751.SACTE_2357.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

G2NHN4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTLPRFAPM LATPGPLPSA AVDDQWAYEV KQDGQRALVY LPGDGSMELR
60 70 80 90 100
ARSGTVITAA YPDLAGLGAA LGGVPAVLDG EIVALDSQGR SDFERLQSRM
110 120 130 140 150
GLSGSPAKAA RAAERVPAQL VLFDALFLRD ASLVSLGYRE RRAALEGLGL
160 170 180 190 200
DGPRWSTPSV VVGHGRQALD MTREAGLEGV LAKRLNSVYE PGVRSRSWIK
210 220 230 240 250
IRHALTADVV VGGWVPGRGR LGGLPGALLV GERHEGGLRY AGSVGTGWSD
260 270 280 290 300
AERHRLAELL RVAAIDTCPF DVAPRVAGAR WVLPRLVGEV RYSTRTRAGR
310 320
LRQPSWHRLR PDLAPDDLET
Length:320
Mass (Da):34,314
Last modified:November 16, 2011 - v1
Checksum:iD2D0F691F26FDD5F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002993 Genomic DNA. Translation: AEN10245.1.
RefSeqiWP_014046230.1. NC_015953.1.
YP_004802785.1. NC_015953.1.

Genome annotation databases

EnsemblBacteriaiAEN10245; AEN10245; SACTE_2357.
KEGGissx:SACTE_2357.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002993 Genomic DNA. Translation: AEN10245.1.
RefSeqiWP_014046230.1. NC_015953.1.
YP_004802785.1. NC_015953.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi862751.SACTE_2357.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEN10245; AEN10245; SACTE_2357.
KEGGissx:SACTE_2357.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciSSP862751:GHMW-2387-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SirexAA-E / ActEImported.

Entry informationi

Entry nameiG2NHN4_STREK
AccessioniPrimary (citable) accession number: G2NHN4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 24, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.