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G2MTV9 (G2MTV9_9THEO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA polymerase LigD, ligase domain protein EMBL AEM79494.1
Gene names
ORF Names:Thewi_2144 EMBL AEM79494.1
OrganismThermoanaerobacter wiegelii Rt8.B1 EMBL AEM79494.1
Taxonomic identifier697303 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacteraceae › Thermoanaerobacter ›

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEM79494.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G2MTV9 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 418EB8C3E8AA0CA6

FASTA30735,795
        10         20         30         40         50         60 
MSMIEEKISP MLASSSDPFD SPEWIYEIKW DGSRTIAFLS SKTRLQDRRL VDITYKFPDL 

        70         80         90        100        110        120 
ALLHKQIKAK EAILDGELVV LKNGKPSYKS IMSRKHQQNL LKINLLSKIM PVIFITWDIL 

       130        140        150        160        170        180 
YLNGKPLVEL PLIERKDILR KTVKENEIIK ISDFIFEHGK MLFEETGKKG LEGIVAKKAD 

       190        200        210        220        230        240 
SKYLIGKRSK LWLKSKHFIV INAVIIGYRT DKTALILGLY DEENNLINIG SCESGLSQKE 

       250        260        270        280        290        300 
LKAFYEVAKE IKAPDNYYNF KEKNVQWLKP LLTCKVRFME WSENMKMRAP SFIQFEYNVK 


PEECRFE

« Hide

References

[1]"Complete sequence of Thermoanaerobacter wiegelii Rt8.B1."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Zeytun A., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hemme C., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Rt8.B1 EMBL AEM79494.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002991 Genomic DNA. Translation: AEM79494.1.
RefSeqYP_004820778.1. NC_015958.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM79494; AEM79494; Thewi_2144.
GeneID11083754.
KEGGtwi:Thewi_2144.

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2MTV9_9THEO
AccessionPrimary (citable) accession number: G2MTV9
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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