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G2LXA7

- G2LXA7_9XANT

UniProt

G2LXA7 - G2LXA7_9XANT

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

XACM_1324

Organism
Xanthomonas axonopodis pv. citrumelo F1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciXALF981368:GH9H-1324-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    ORF Names:XACM_1324Imported
    OrganismiXanthomonas axonopodis pv. citrumelo F1Imported
    Taxonomic identifieri981368 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000001276: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G2LXA7-1 [UniParc]FASTAAdd to Basket

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    MKRFAALYRA LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVTS    50
    ARMRIASSGE LREWITDTAG VADWLVADSY DHVGDLAETL ALLLDDPVAE 100
    AADLPLAEWI EQRLLPIANQ DVQVRKACIV QAWRSLAFDE RLVFNKLLTG 150
    ALRVGVSQRL VQQALAELSG VDIARIAQRM LGSWRPHPTY LADLLTSEEL 200
    PGDRQQPYPF FLASPLEAEV DTLGPIDDWL LEWKWDGIRL QLIRRAGEAA 250
    LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ PLPMPFTALQ 300
    TRIQRLKPGP KTLAAAPARV VAYDLLELAG EDLRERPLQE RRALLEGVLA 350
    TLADPRIVAS PLVQVSDWQA AAHVRVEARE RGVEGLMLKR ASSVYQSGRR 400
    RGDWWKWKID PLTIDAVLLY AQAGHGRRST LYTDYTFGLW HEGQLVPIAK 450
    AYSGLDDKEI IQLDRWIRAN TTERFGPVRA VTAHHVFELG FEAVNRSARH 500
    KSGIAVRFPR ILRWRHDKPM AEADHLSTLQ ALAR 534
    Length:534
    Mass (Da):59,960
    Last modified:November 16, 2011 - v1
    Checksum:iDEE590C8D68791C5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002914 Genomic DNA. Translation: AEO41608.1.
    RefSeqiWP_014089698.1. NC_016010.1.
    YP_004850906.1. NC_016010.1.

    Genome annotation databases

    EnsemblBacteriaiAEO41608; AEO41608; XACM_1324.
    GeneIDi11131993.
    KEGGixax:XACM_1324.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002914 Genomic DNA. Translation: AEO41608.1 .
    RefSeqi WP_014089698.1. NC_016010.1.
    YP_004850906.1. NC_016010.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEO41608 ; AEO41608 ; XACM_1324 .
    GeneIDi 11131993.
    KEGGi xax:XACM_1324.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci XALF981368:GH9H-1324-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative Genomic Analysis of Xanthomonas axonopodis pv. citrumelo F1, Which Causes Citrus Bacterial Spot Disease, and Related Strains Provides Insights into Virulence and Host Specificity."
      Jalan N., Aritua V., Kumar D., Yu F., Jones J.B., Graham J.H., Setubal J.C., Wang N.
      J. Bacteriol. 193:6342-6357(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: F1Imported.

    Entry informationi

    Entry nameiG2LXA7_9XANT
    AccessioniPrimary (citable) accession number: G2LXA7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3