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G2LVW3

- G2LVW3_9XANT

UniProt

G2LVW3 - G2LVW3_9XANT

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

lig3

Organism
Xanthomonas axonopodis pv. citrumelo F1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciXALF981368:GH9H-2420-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Name:lig3Imported
    ORF Names:XACM_2420Imported
    OrganismiXanthomonas axonopodis pv. citrumelo F1Imported
    Taxonomic identifieri981368 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000001276: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G2LVW3-1 [UniParc]FASTAAdd to Basket

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    MSLSEYRRKR SFNKTREPEP GKALPPGQRA IFVVQLHHAS RRHYDFRLQV    50
    GDALKSWAVP KGPSYDPKVK RMAVEVEDHP VDYASFEGEI PKGEYGGGHV 100
    AQFDHGVWAT AGDPEAQLAK GHLRFELFGN KLKGGWHLVR SGKPARQPQW 150
    LLFKDDDAYA GTLEADDLLA DVAAAPAEDV RRAGAGKTQR KALTTVPPPA 200
    AKRRGTWAKQ ALALSNARRA EMEDAPFAPQ LAKLGQSPPE GAQWLHEIKW 250
    DGYRILATVT NGKVRLWSRN ALEWTDKTPE IADAIRSLGL RSAQIDGELI 300
    AGRGTKDDFN LLQATLSGER QVPLALAVFD LLHVDGVDIS EAPLRERKRL 350
    LQQVLEAAPH THLAYSSHVE GDGTEAFRVA GQQHFEGIIS KRADRPYRDG 400
    RSDDWRKTKQ LASQEYAVVG YTAPKGSRSG FGSLLLATPD PVHGWLYVGR 450
    VGSGFSDALM REVTPQLEGG GRKPTAHIPT EDTDLRGATW FAPRFVVEVF 500
    YRGIGGQQLL RQASFKALRP DKRIADLADS DAGNGPATPS SARRSATTRA 550
    AKDTATQAPK RAATRATAPA RKSAVATPSS AALPTLSSPT KLIYPDIRAT 600
    KGDVWDYYQA VMDHLLPQIV GRPLSIIRCP SGAEKPCFFQ KHHTAGLERV 650
    SSVKLTEETG TNAYYLVVED APGLLELVQF NALEFHPWGS HADRPDVADR 700
    VVFDLDPGPD VPFAEVKRAA TDIRKLLAQL ELESFLRVSG GKGLHVVVPL 750
    NPGCDWEVTK RFAKGFADAL AQAQPQRFIA TATKRLRNKR IFVDYLRNGR 800
    GATAVASYSL RGRPGAPVAL PLAWSDLSKL QRADAFTLRD VPEKLRRRRK 850
    DPWADMDGIR QNLARWAEQD QD 872
    Length:872
    Mass (Da):96,057
    Last modified:November 16, 2011 - v1
    Checksum:i272D7CF4869F586E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002914 Genomic DNA. Translation: AEO42681.1.
    RefSeqiWP_014090385.1. NC_016010.1.
    YP_004851979.1. NC_016010.1.

    Genome annotation databases

    EnsemblBacteriaiAEO42681; AEO42681; XACM_2420.
    GeneIDi11131677.
    KEGGixax:XACM_2420.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002914 Genomic DNA. Translation: AEO42681.1 .
    RefSeqi WP_014090385.1. NC_016010.1.
    YP_004851979.1. NC_016010.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEO42681 ; AEO42681 ; XACM_2420 .
    GeneIDi 11131677.
    KEGGi xax:XACM_2420.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci XALF981368:GH9H-2420-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative Genomic Analysis of Xanthomonas axonopodis pv. citrumelo F1, Which Causes Citrus Bacterial Spot Disease, and Related Strains Provides Insights into Virulence and Host Specificity."
      Jalan N., Aritua V., Kumar D., Yu F., Jones J.B., Graham J.H., Setubal J.C., Wang N.
      J. Bacteriol. 193:6342-6357(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: F1Imported.

    Entry informationi

    Entry nameiG2LVW3_9XANT
    AccessioniPrimary (citable) accession number: G2LVW3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3