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G2LVW3

- G2LVW3_9XANT

UniProt

G2LVW3 - G2LVW3_9XANT

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
lig3, XACM_2420
Organism
Xanthomonas axonopodis pv. citrumelo F1
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXALF981368:GH9H-2420-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Name:lig3Imported
ORF Names:XACM_2420Imported
OrganismiXanthomonas axonopodis pv. citrumelo F1Imported
Taxonomic identifieri981368 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001276: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2LVW3-1 [UniParc]FASTAAdd to Basket

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MSLSEYRRKR SFNKTREPEP GKALPPGQRA IFVVQLHHAS RRHYDFRLQV    50
GDALKSWAVP KGPSYDPKVK RMAVEVEDHP VDYASFEGEI PKGEYGGGHV 100
AQFDHGVWAT AGDPEAQLAK GHLRFELFGN KLKGGWHLVR SGKPARQPQW 150
LLFKDDDAYA GTLEADDLLA DVAAAPAEDV RRAGAGKTQR KALTTVPPPA 200
AKRRGTWAKQ ALALSNARRA EMEDAPFAPQ LAKLGQSPPE GAQWLHEIKW 250
DGYRILATVT NGKVRLWSRN ALEWTDKTPE IADAIRSLGL RSAQIDGELI 300
AGRGTKDDFN LLQATLSGER QVPLALAVFD LLHVDGVDIS EAPLRERKRL 350
LQQVLEAAPH THLAYSSHVE GDGTEAFRVA GQQHFEGIIS KRADRPYRDG 400
RSDDWRKTKQ LASQEYAVVG YTAPKGSRSG FGSLLLATPD PVHGWLYVGR 450
VGSGFSDALM REVTPQLEGG GRKPTAHIPT EDTDLRGATW FAPRFVVEVF 500
YRGIGGQQLL RQASFKALRP DKRIADLADS DAGNGPATPS SARRSATTRA 550
AKDTATQAPK RAATRATAPA RKSAVATPSS AALPTLSSPT KLIYPDIRAT 600
KGDVWDYYQA VMDHLLPQIV GRPLSIIRCP SGAEKPCFFQ KHHTAGLERV 650
SSVKLTEETG TNAYYLVVED APGLLELVQF NALEFHPWGS HADRPDVADR 700
VVFDLDPGPD VPFAEVKRAA TDIRKLLAQL ELESFLRVSG GKGLHVVVPL 750
NPGCDWEVTK RFAKGFADAL AQAQPQRFIA TATKRLRNKR IFVDYLRNGR 800
GATAVASYSL RGRPGAPVAL PLAWSDLSKL QRADAFTLRD VPEKLRRRRK 850
DPWADMDGIR QNLARWAEQD QD 872
Length:872
Mass (Da):96,057
Last modified:November 16, 2011 - v1
Checksum:i272D7CF4869F586E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002914 Genomic DNA. Translation: AEO42681.1.
RefSeqiWP_014090385.1. NC_016010.1.
YP_004851979.1. NC_016010.1.

Genome annotation databases

EnsemblBacteriaiAEO42681; AEO42681; XACM_2420.
GeneIDi11131677.
KEGGixax:XACM_2420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002914 Genomic DNA. Translation: AEO42681.1 .
RefSeqi WP_014090385.1. NC_016010.1.
YP_004851979.1. NC_016010.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEO42681 ; AEO42681 ; XACM_2420 .
GeneIDi 11131677.
KEGGi xax:XACM_2420.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci XALF981368:GH9H-2420-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative Genomic Analysis of Xanthomonas axonopodis pv. citrumelo F1, Which Causes Citrus Bacterial Spot Disease, and Related Strains Provides Insights into Virulence and Host Specificity."
    Jalan N., Aritua V., Kumar D., Yu F., Jones J.B., Graham J.H., Setubal J.C., Wang N.
    J. Bacteriol. 193:6342-6357(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: F1Imported.

Entry informationi

Entry nameiG2LVW3_9XANT
AccessioniPrimary (citable) accession number: G2LVW3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: September 3, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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