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Protein

Alpha-amylase

Gene

XACM_0793

Organism
Xanthomonas axonopodis pv. citrumelo F1
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciXALF981368:GH9H-793-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:XACM_0793Imported
OrganismiXanthomonas axonopodis pv. citrumelo F1Imported
Taxonomic identifieri981368 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001276: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

G2LSY7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLLLTTANA QADVILHAFN WPYATVEARA KQIADAGYRK VLVAPAYRSE
60 70 80 90 100
GSAWWARYQP QDIRLIDNPL GDTAAFKKMV QALANNGVET YADIVFNHMA
110 120 130 140 150
NEAATRSDLN YPGSAVLSQY AANPGRYDSL RLFGTLQSNF LSASDFGPAQ
160 170 180 190 200
CISNYNDAYQ VRNYRICGGG SDPGLPDLVG NDWVVQQQRA YLQALKSIGV
210 220 230 240 250
TGFRVDAAKH MTFDHLNRVF DAGIRSGVYV FGEVITGGGT GNGDYDQFLA
260 270 280 290 300
PYLQSTPHAA YDFPLFNAVR NAFAIGASMQ QLVDPAASGQ ALPGNRAVTF
310 320 330 340 350
AVTHDIPNNA GFRYAILDPV DETLAYAYLI GRNGGMPMIY TDNNESGDNR
360 370 380 390 400
WVNAYLRDDL RRMIGFHNGV QGTDMQVLSS SSCHILFRRG SLGIVGINKC
410 420 430 440 450
GNPVTTTVGM NNSVLYWNAD YVDALGSGNV VRISSSSYTF TLPARGARMW

RR
Length:452
Mass (Da):49,363
Last modified:November 16, 2011 - v1
Checksum:i173B99F0EE053AA6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002914 Genomic DNA. Translation: AEO41097.1.
RefSeqiWP_008573521.1. NC_016010.1.
YP_004850395.1. NC_016010.1.

Genome annotation databases

EnsemblBacteriaiAEO41097; AEO41097; XACM_0793.
GeneIDi11133283.
KEGGixax:XACM_0793.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002914 Genomic DNA. Translation: AEO41097.1.
RefSeqiWP_008573521.1. NC_016010.1.
YP_004850395.1. NC_016010.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEO41097; AEO41097; XACM_0793.
GeneIDi11133283.
KEGGixax:XACM_0793.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciXALF981368:GH9H-793-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative Genomic Analysis of Xanthomonas axonopodis pv. citrumelo F1, Which Causes Citrus Bacterial Spot Disease, and Related Strains Provides Insights into Virulence and Host Specificity."
    Jalan N., Aritua V., Kumar D., Yu F., Jones J.B., Graham J.H., Setubal J.C., Wang N.
    J. Bacteriol. 193:6342-6357(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: F1Imported.

Entry informationi

Entry nameiG2LSY7_9XANT
AccessioniPrimary (citable) accession number: G2LSY7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: March 4, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.