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G2KWH2

- G2KWH2_LACSM

UniProt

G2KWH2 - G2KWH2_LACSM

Protein

Elongation factor Tu

Gene

tuf

Organism
Lactobacillus sanfranciscensis (strain TMW 1.1304)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciLSAN714313:GIWZ-1012-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotationImported
    Ordered Locus Names:LSA_09660Imported
    OrganismiLactobacillus sanfranciscensis (strain TMW 1.1304)Imported
    Taxonomic identifieri714313 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000001285: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G2KWH2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKEHYERTK PHVNIGTIGH IDHGKTTLTA AISKVLSDRG LAKAEDFADI    50
    DAAPEEKERG ITINTAHIEY ETEKRHYAHI DAPGHADYVK NMITGAAQMD 100
    GAILVVAATD GPMPQTREHI LLAKQVGVDY IIVFLNKTDM VDDEELIDLV 150
    EMEVRDLLSE YGYDGDNTPV IRGSALKALN GDKEAEEQIM KLMDTVDEYI 200
    PTPERDESKP FMMPIEDVFT ITGRGTVASG RIERGVIKLG DEVEIVGLVE 250
    DVLKTTVTGI EMFRKTLDEG QAGDNIGALL RGVNREQVVR GQVLAAPGSV 300
    QTHEKFSAEV YIMSKEEGGR HTPFFSNYRP QFYFHTTDVT GVIELDKGTE 350
    MVMPGDNTTF HVELTKPVAI EKGTKFTIRE GGHTVGAGTV TSIDD 395
    Length:395
    Mass (Da):43,458
    Last modified:November 16, 2011 - v1
    Checksum:i790C524A9B73474C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002461 Genomic DNA. Translation: AEN99366.1.
    RefSeqiYP_004841298.1. NC_015978.1.

    Genome annotation databases

    EnsemblBacteriaiAEN99366; AEN99366; LSA_09660.
    GeneIDi11150634.
    KEGGilsn:LSA_09660.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002461 Genomic DNA. Translation: AEN99366.1 .
    RefSeqi YP_004841298.1. NC_015978.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEN99366 ; AEN99366 ; LSA_09660 .
    GeneIDi 11150634.
    KEGGi lsn:LSA_09660.

    Phylogenomic databases

    KOi K02358.

    Enzyme and pathway databases

    BioCyci LSAN714313:GIWZ-1012-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic analysis reveals Lactobacillus sanfranciscensis as stable element in traditional sourdoughs."
      Vogel R.F., Pavlovic M., Ehrmann M.A., Wiezer A., Liesegang H., Offschanka S., Voget S., Angelov A., Bocker G., Liebl W.
      Microb. Cell Fact. 10:S6-S6(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TMW 1.1304Imported.

    Entry informationi

    Entry nameiG2KWH2_LACSM
    AccessioniPrimary (citable) accession number: G2KWH2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3