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G2KWH2 (G2KWH2_LACSM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118 EMBL AEN99366.1
Ordered Locus Names:LSA_09660 EMBL AEN99366.1
OrganismLactobacillus sanfranciscensis (strain TMW 1.1304) [Complete proteome] [HAMAP] EMBL AEN99366.1
Taxonomic identifier714313 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
G2KWH2 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 790C524A9B73474C

FASTA39543,458
        10         20         30         40         50         60 
MAKEHYERTK PHVNIGTIGH IDHGKTTLTA AISKVLSDRG LAKAEDFADI DAAPEEKERG 

        70         80         90        100        110        120 
ITINTAHIEY ETEKRHYAHI DAPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLAKQVGVDY IIVFLNKTDM VDDEELIDLV EMEVRDLLSE YGYDGDNTPV IRGSALKALN 

       190        200        210        220        230        240 
GDKEAEEQIM KLMDTVDEYI PTPERDESKP FMMPIEDVFT ITGRGTVASG RIERGVIKLG 

       250        260        270        280        290        300 
DEVEIVGLVE DVLKTTVTGI EMFRKTLDEG QAGDNIGALL RGVNREQVVR GQVLAAPGSV 

       310        320        330        340        350        360 
QTHEKFSAEV YIMSKEEGGR HTPFFSNYRP QFYFHTTDVT GVIELDKGTE MVMPGDNTTF 

       370        380        390 
HVELTKPVAI EKGTKFTIRE GGHTVGAGTV TSIDD 

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References

[1]"Genomic analysis reveals Lactobacillus sanfranciscensis as stable element in traditional sourdoughs."
Vogel R.F., Pavlovic M., Ehrmann M.A., Wiezer A., Liesegang H., Offschanka S., Voget S., Angelov A., Bocker G., Liebl W.
Microb. Cell Fact. 10:S6-S6(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TMW 1.1304 EMBL AEN99366.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002461 Genomic DNA. Translation: AEN99366.1.
RefSeqYP_004841298.1. NC_015978.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEN99366; AEN99366; LSA_09660.
GeneID11150634.
KEGGlsn:LSA_09660.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycLSAN714313:GIWZ-1012-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2KWH2_LACSM
AccessionPrimary (citable) accession number: G2KWH2
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)