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Protein
Submitted name:

Putative aminotransferase A

Gene

patA

Organism
Lactobacillus sanfranciscensis (strain TMW 1.1304)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. aromatic-amino-acid:2-oxoglutarate aminotransferase activity Source: UniProtKB-EC
  2. L-aspartate:2-oxoglutarate aminotransferase activity Source: UniProtKB-EC
  3. L-phenylalanine:2-oxoglutarate aminotransferase activity Source: UniProtKB-EC
  4. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciLSAN714313:GIWZ-91-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative aminotransferase AImported (EC:2.6.1.1Imported, EC:2.6.1.57Imported)
Gene namesi
Name:patAImported
Ordered Locus Names:LSA_00870Imported
OrganismiLactobacillus sanfranciscensis (strain TMW 1.1304)Imported
Taxonomic identifieri714313 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000001285: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00841.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2KTY0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHNDQGHYAP TKGTKKLREA AAHFLNSKYD LNYDPETEII ITAGATGGIY
60 70 80 90 100
TALTSILNPG DEVLIPTPIF PLYIPITLLR GAKPVFMDTS KSGFVLSPAQ
110 120 130 140 150
LEQTLKYHPK TKAIVLNFPS NPTGKTYNEV ALKELATILK QHDIFVISDE
160 170 180 190 200
IYSELTYDAK HVSIANLLPD QTILLNGVSK SHAMTGWRIG IMAAPKDITS
210 220 230 240 250
QLEKIDQFTI TSPTTNAQFA AAEALENGSD DAVAMKAEYQ KRRDYVYQEL
260 270 280 290 300
KALGFEIANP DGAFYIFAKI PANLIQNSMD FAYDLARKGK VAVVPGSAFG
310 320 330
PGGEGYVRIS YATSMENLQK AIHNIKEYVA NEGKR
Length:335
Mass (Da):36,796
Last modified:November 16, 2011 - v1
Checksum:iE39E269D078F5F25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002461 Genomic DNA. Translation: AEN98573.1.
RefSeqiYP_004840505.1. NC_015978.1.

Genome annotation databases

EnsemblBacteriaiAEN98573; AEN98573; LSA_00870.
GeneIDi11150369.
KEGGilsn:LSA_00870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002461 Genomic DNA. Translation: AEN98573.1.
RefSeqiYP_004840505.1. NC_015978.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEN98573; AEN98573; LSA_00870.
GeneIDi11150369.
KEGGilsn:LSA_00870.

Phylogenomic databases

KOiK00841.

Enzyme and pathway databases

BioCyciLSAN714313:GIWZ-91-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genomic analysis reveals Lactobacillus sanfranciscensis as stable element in traditional sourdoughs."
    Vogel R.F., Pavlovic M., Ehrmann M.A., Wiezer A., Liesegang H., Offschanka S., Voget S., Angelov A., Bocker G., Liebl W.
    Microb. Cell Fact. 10:S6-S6(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TMW 1.1304Imported.

Entry informationi

Entry nameiG2KTY0_LACSM
AccessioniPrimary (citable) accession number: G2KTY0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.